Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AC234783.1-201ENST00000441761 496 ntBASIC15.07■□□□□ 0
RFX6Q8HWS3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.07■□□□□ 0
RFX6Q8HWS3 COX20P2-201ENST00000452636 358 ntBASIC15.07■□□□□ 0
RFX6Q8HWS3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.07■□□□□ 0
RFX6Q8HWS3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.07■□□□□ 0
RFX6Q8HWS3 AC005225.4-201ENST00000557330 545 ntBASIC15.07■□□□□ 0
RFX6Q8HWS3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.07■□□□□ 0
RFX6Q8HWS3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.07■□□□□ 0
RFX6Q8HWS3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.07■□□□□ 0
RFX6Q8HWS3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RFX6Q8HWS3 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.07■□□□□ 0
RFX6Q8HWS3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.07■□□□□ 0
RFX6Q8HWS3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.07■□□□□ 0
RFX6Q8HWS3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.07■□□□□ 0
RFX6Q8HWS3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RFX6Q8HWS3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 AC111170.3-201ENST00000624282 2464 ntBASIC15.06■□□□□ 0
RFX6Q8HWS3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RFX6Q8HWS3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.06■□□□□ 0
RFX6Q8HWS3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 AC026954.1-201ENST00000429771 1293 ntBASIC15.06■□□□□ 0
RFX6Q8HWS3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.06■□□□□ 0
RFX6Q8HWS3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.06■□□□□ 0
RFX6Q8HWS3 KLF2P4-201ENST00000451959 1225 ntBASIC15.06■□□□□ 0
RFX6Q8HWS3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.06■□□□□ 0
RFX6Q8HWS3 CTBP2P5-201ENST00000454986 1264 ntBASIC15.06■□□□□ 0
RFX6Q8HWS3 TMEM198B-204ENST00000484016 896 ntBASIC15.06■□□□□ 0
RFX6Q8HWS3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.06■□□□□ 0
RFX6Q8HWS3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.06■□□□□ 0
RFX6Q8HWS3 AC104506.1-201ENST00000609247 429 ntBASIC15.06■□□□□ 0
RFX6Q8HWS3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.06■□□□□ 0
RFX6Q8HWS3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.06■□□□□ 0
RFX6Q8HWS3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC15.06■□□□□ 0
RFX6Q8HWS3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RFX6Q8HWS3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.06■□□□□ 0
RFX6Q8HWS3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RFX6Q8HWS3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.05■□□□□ 0
RFX6Q8HWS3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.05■□□□□ 0
RFX6Q8HWS3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RFX6Q8HWS3 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RFX6Q8HWS3 AC130686.1-201ENST00000622936 2466 ntBASIC15.05■□□□□ 0
RFX6Q8HWS3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RFX6Q8HWS3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RFX6Q8HWS3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.05■□□□□ 0
RFX6Q8HWS3 LINC02486-201ENST00000604157 3000 ntBASIC15.05■□□□□ 0
RFX6Q8HWS3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
RFX6Q8HWS3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFX6Q8HWS3 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.05■□□□□ -0
RFX6Q8HWS3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.05■□□□□ -0
RFX6Q8HWS3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.05■□□□□ -0
RFX6Q8HWS3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.05■□□□□ -0
RFX6Q8HWS3 CR383656.12-201ENST00000549567 513 ntBASIC15.05■□□□□ -0
RFX6Q8HWS3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFX6Q8HWS3 AC023310.1-201ENST00000554836 735 ntBASIC15.05■□□□□ -0
RFX6Q8HWS3 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.05■□□□□ -0
RFX6Q8HWS3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.05■□□□□ -0
RFX6Q8HWS3 AC012645.4-201ENST00000610691 1061 ntBASIC15.05■□□□□ -0
RFX6Q8HWS3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.05■□□□□ -0
RFX6Q8HWS3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFX6Q8HWS3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
RFX6Q8HWS3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RFX6Q8HWS3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.05■□□□□ -0
RFX6Q8HWS3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.05■□□□□ -0
RFX6Q8HWS3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.05■□□□□ -0
RFX6Q8HWS3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
RFX6Q8HWS3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RFX6Q8HWS3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.05■□□□□ -0
RFX6Q8HWS3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
RFX6Q8HWS3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RFX6Q8HWS3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.05■□□□□ -0
RFX6Q8HWS3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.05■□□□□ -0
RFX6Q8HWS3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms