Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 AL591424.1-201ENST00000442569 1213 ntBASIC13.63□□□□□ -0.23
LPCAT4Q643R3 SERBP1P3-201ENST00000459980 809 ntBASIC13.63□□□□□ -0.23
LPCAT4Q643R3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 AC092117.1-201ENST00000621230 3250 ntBASIC13.63□□□□□ -0.23
LPCAT4Q643R3 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 DDX12P-201ENST00000432996 2947 ntBASIC13.63□□□□□ -0.23
LPCAT4Q643R3 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 MSNP1-201ENST00000511640 1732 ntBASIC13.62□□□□□ -0.23
LPCAT4Q643R3 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 AC027601.4-201ENST00000611259 610 ntBASIC13.62□□□□□ -0.23
LPCAT4Q643R3 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.62□□□□□ -0.23
LPCAT4Q643R3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 AL138799.1-201ENST00000448213 1675 ntBASIC13.62□□□□□ -0.23
LPCAT4Q643R3 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LPCAT4Q643R3 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms