Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 MIR6775-201ENST00000617557 69 ntBASIC12.27□□□□□ -0.45
COL10A1Q03692 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.27□□□□□ -0.45
COL10A1Q03692 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.27□□□□□ -0.45
COL10A1Q03692 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
COL10A1Q03692 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
COL10A1Q03692 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
COL10A1Q03692 AC089987.1-201ENST00000551654 2209 ntBASIC12.27□□□□□ -0.45
COL10A1Q03692 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.27□□□□□ -0.45
COL10A1Q03692 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
COL10A1Q03692 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
COL10A1Q03692 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
COL10A1Q03692 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
COL10A1Q03692 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.27□□□□□ -0.45
COL10A1Q03692 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.27□□□□□ -0.45
COL10A1Q03692 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
COL10A1Q03692 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
COL10A1Q03692 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
COL10A1Q03692 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.26□□□□□ -0.45
COL10A1Q03692 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.26□□□□□ -0.45
COL10A1Q03692 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
COL10A1Q03692 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
COL10A1Q03692 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.26□□□□□ -0.45
COL10A1Q03692 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.26□□□□□ -0.45
COL10A1Q03692 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
COL10A1Q03692 AC010141.1-201ENST00000411585 623 ntBASIC12.26□□□□□ -0.45
COL10A1Q03692 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.26□□□□□ -0.45
COL10A1Q03692 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.26□□□□□ -0.45
COL10A1Q03692 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.26□□□□□ -0.45
COL10A1Q03692 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
COL10A1Q03692 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 PARP8-218ENST00000513738 596 ntTSL 4 BASIC12.26□□□□□ -0.45
COL10A1Q03692 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.26□□□□□ -0.45
COL10A1Q03692 HILS1-202ENST00000545329 423 ntBASIC12.26□□□□□ -0.45
COL10A1Q03692 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.26□□□□□ -0.45
COL10A1Q03692 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 AC027237.1-201ENST00000560942 655 ntBASIC12.26□□□□□ -0.45
COL10A1Q03692 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.26□□□□□ -0.45
COL10A1Q03692 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
COL10A1Q03692 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
COL10A1Q03692 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.26□□□□□ -0.45
COL10A1Q03692 AC020910.6-201ENST00000623084 1459 ntBASIC12.26□□□□□ -0.45
COL10A1Q03692 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
COL10A1Q03692 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL10A1Q03692 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
COL10A1Q03692 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms