Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.88■□□□□ 0.29
IRX3P78415 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
IRX3P78415 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
IRX3P78415 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
IRX3P78415 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
IRX3P78415 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.88■□□□□ 0.29
IRX3P78415 DUX4L50-201ENST00000455245 715 ntBASIC16.88■□□□□ 0.29
IRX3P78415 RN7SL530P-201ENST00000485097 298 ntBASIC16.88■□□□□ 0.29
IRX3P78415 AC114947.1-202ENST00000514136 344 ntBASIC16.88■□□□□ 0.29
IRX3P78415 AC003686.1-201ENST00000550956 1034 ntBASIC16.88■□□□□ 0.29
IRX3P78415 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.88■□□□□ 0.29
IRX3P78415 RPL17P45-201ENST00000586289 509 ntBASIC16.88■□□□□ 0.29
IRX3P78415 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
IRX3P78415 AL161772.1-201ENST00000610494 4412 ntBASIC16.88■□□□□ 0.29
IRX3P78415 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
IRX3P78415 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
IRX3P78415 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
IRX3P78415 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
IRX3P78415 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IRX3P78415 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.87■□□□□ 0.29
IRX3P78415 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.87■□□□□ 0.29
IRX3P78415 KRT8P31-201ENST00000504812 1408 ntBASIC16.87■□□□□ 0.29
IRX3P78415 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.87■□□□□ 0.29
IRX3P78415 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
IRX3P78415 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.87■□□□□ 0.29
IRX3P78415 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
IRX3P78415 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.87■□□□□ 0.29
IRX3P78415 AC087386.2-201ENST00000623212 4637 ntBASIC16.87■□□□□ 0.29
IRX3P78415 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
IRX3P78415 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.87■□□□□ 0.29
IRX3P78415 AL590440.2-201ENST00000641973 1595 ntBASIC16.87■□□□□ 0.29
IRX3P78415 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
IRX3P78415 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.87■□□□□ 0.29
IRX3P78415 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.87■□□□□ 0.29
IRX3P78415 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.87■□□□□ 0.29
IRX3P78415 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.87■□□□□ 0.29
IRX3P78415 CTBP2P4-201ENST00000513884 920 ntBASIC16.87■□□□□ 0.29
IRX3P78415 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.87■□□□□ 0.29
IRX3P78415 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.87■□□□□ 0.29
IRX3P78415 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.87■□□□□ 0.29
IRX3P78415 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.87■□□□□ 0.29
IRX3P78415 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.87■□□□□ 0.29
IRX3P78415 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.87■□□□□ 0.29
IRX3P78415 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX3P78415 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
IRX3P78415 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.87■□□□□ 0.29
IRX3P78415 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.86■□□□□ 0.29
IRX3P78415 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
IRX3P78415 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.86■□□□□ 0.29
IRX3P78415 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
IRX3P78415 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.86■□□□□ 0.29
IRX3P78415 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
IRX3P78415 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.86■□□□□ 0.29
IRX3P78415 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX3P78415 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.86■□□□□ 0.29
IRX3P78415 FTH1P22-201ENST00000456305 520 ntBASIC16.86■□□□□ 0.29
IRX3P78415 RPL18AP3-201ENST00000462885 528 ntBASIC16.86■□□□□ 0.29
IRX3P78415 RN7SL81P-201ENST00000493781 261 ntBASIC16.86■□□□□ 0.29
IRX3P78415 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms