Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
LIMK2P53671 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 MIR663B-201ENST00000408361 115 ntBASIC14.59□□□□□ -0.07
LIMK2P53671 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.59□□□□□ -0.07
LIMK2P53671 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.59□□□□□ -0.07
LIMK2P53671 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.59□□□□□ -0.07
LIMK2P53671 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.59□□□□□ -0.07
LIMK2P53671 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.59□□□□□ -0.07
LIMK2P53671 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.59□□□□□ -0.07
LIMK2P53671 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
LIMK2P53671 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LIMK2P53671 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
LIMK2P53671 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.59□□□□□ -0.07
LIMK2P53671 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LIMK2P53671 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.59□□□□□ -0.07
LIMK2P53671 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LIMK2P53671 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LIMK2P53671 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LIMK2P53671 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LIMK2P53671 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LIMK2P53671 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LIMK2P53671 AC009093.10-201ENST00000641956 1442 ntBASIC14.58□□□□□ -0.07
LIMK2P53671 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.58□□□□□ -0.07
LIMK2P53671 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
LIMK2P53671 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LIMK2P53671 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LIMK2P53671 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LIMK2P53671 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.58□□□□□ -0.08
LIMK2P53671 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK2P53671 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK2P53671 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK2P53671 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.58□□□□□ -0.08
LIMK2P53671 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK2P53671 CALR4P-201ENST00000431943 946 ntBASIC14.58□□□□□ -0.08
LIMK2P53671 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.58□□□□□ -0.08
LIMK2P53671 AL161932.2-201ENST00000435436 679 ntBASIC14.58□□□□□ -0.08
LIMK2P53671 POM121L10P-201ENST00000436994 1285 ntBASIC14.58□□□□□ -0.08
LIMK2P53671 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.58□□□□□ -0.08
LIMK2P53671 HSPB1P2-201ENST00000448722 546 ntBASIC14.58□□□□□ -0.08
LIMK2P53671 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.58□□□□□ -0.08
LIMK2P53671 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.58□□□□□ -0.08
LIMK2P53671 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.58□□□□□ -0.08
LIMK2P53671 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.58□□□□□ -0.08
LIMK2P53671 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.58□□□□□ -0.08
LIMK2P53671 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
LIMK2P53671 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.58□□□□□ -0.08
LIMK2P53671 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
LIMK2P53671 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.58□□□□□ -0.08
LIMK2P53671 RN7SL713P-201ENST00000582127 302 ntBASIC14.58□□□□□ -0.08
LIMK2P53671 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.58□□□□□ -0.08
LIMK2P53671 AC104506.1-201ENST00000609247 429 ntBASIC14.58□□□□□ -0.08
LIMK2P53671 AC244157.2-201ENST00000616239 1006 ntBASIC14.58□□□□□ -0.08
LIMK2P53671 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.58□□□□□ -0.08
LIMK2P53671 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK2P53671 AGAP10P-201ENST00000454844 2418 ntBASIC14.58□□□□□ -0.08
LIMK2P53671 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LIMK2P53671 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LIMK2P53671 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK2P53671 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK2P53671 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.58□□□□□ -0.08
LIMK2P53671 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK2P53671 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LIMK2P53671 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.58□□□□□ -0.08
LIMK2P53671 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.58□□□□□ -0.08
LIMK2P53671 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK2P53671 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.58□□□□□ -0.08
LIMK2P53671 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.58□□□□□ -0.08
LIMK2P53671 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.58□□□□□ -0.08
LIMK2P53671 CICP17-201ENST00000418553 2377 ntBASIC14.58□□□□□ -0.08
LIMK2P53671 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.58□□□□□ -0.08
LIMK2P53671 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIMK2P53671 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
LIMK2P53671 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.57□□□□□ -0.08
LIMK2P53671 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.57□□□□□ -0.08
LIMK2P53671 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.57□□□□□ -0.08
LIMK2P53671 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 AC005252.3-201ENST00000623855 2258 ntBASIC14.57□□□□□ -0.08
LIMK2P53671 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LIMK2P53671 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms