Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NUP98P52948 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NUP98P52948 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NUP98P52948 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP98P52948 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NUP98P52948 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP98P52948 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.43■□□□□ 0.38
NUP98P52948 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP98P52948 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP98P52948 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NUP98P52948 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC17.43■□□□□ 0.38
NUP98P52948 HLA-DPA2-205ENST00000433582 733 ntBASIC17.43■□□□□ 0.38
NUP98P52948 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC17.43■□□□□ 0.38
NUP98P52948 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC17.43■□□□□ 0.38
NUP98P52948 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC17.43■□□□□ 0.38
NUP98P52948 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NUP98P52948 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC17.43■□□□□ 0.38
NUP98P52948 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC17.43■□□□□ 0.38
NUP98P52948 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC17.43■□□□□ 0.38
NUP98P52948 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC17.43■□□□□ 0.38
NUP98P52948 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
NUP98P52948 AC008620.2-201ENST00000510294 1569 ntBASIC17.43■□□□□ 0.38
NUP98P52948 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NUP98P52948 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP98P52948 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.43■□□□□ 0.38
NUP98P52948 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
NUP98P52948 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP98P52948 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.43■□□□□ 0.38
NUP98P52948 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.43■□□□□ 0.38
NUP98P52948 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP98P52948 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP98P52948 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NUP98P52948 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP98P52948 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
NUP98P52948 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NUP98P52948 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC17.42■□□□□ 0.38
NUP98P52948 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NUP98P52948 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NUP98P52948 ASS1P2-201ENST00000439895 1223 ntBASIC17.42■□□□□ 0.38
NUP98P52948 DDX39AP1-201ENST00000445147 1181 ntBASIC17.42■□□□□ 0.38
NUP98P52948 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NUP98P52948 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.42■□□□□ 0.38
NUP98P52948 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
NUP98P52948 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP98P52948 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
NUP98P52948 AC024075.2-201ENST00000598112 1473 ntBASIC17.42■□□□□ 0.38
NUP98P52948 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NUP98P52948 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP98P52948 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP98P52948 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
NUP98P52948 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP98P52948 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC17.42■□□□□ 0.38
NUP98P52948 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NUP98P52948 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP98P52948 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP98P52948 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC17.42■□□□□ 0.38
NUP98P52948 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC17.42■□□□□ 0.38
NUP98P52948 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP98P52948 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NUP98P52948 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC17.42■□□□□ 0.38
NUP98P52948 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC17.42■□□□□ 0.38
NUP98P52948 AP000354.1-201ENST00000396982 456 ntBASIC17.42■□□□□ 0.38
NUP98P52948 AC103563.1-201ENST00000429316 123 ntBASIC17.42■□□□□ 0.38
NUP98P52948 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.42■□□□□ 0.38
NUP98P52948 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC17.42■□□□□ 0.38
NUP98P52948 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC17.42■□□□□ 0.38
NUP98P52948 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC17.42■□□□□ 0.38
NUP98P52948 AP003392.6-201ENST00000607709 325 ntBASIC17.42■□□□□ 0.38
NUP98P52948 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NUP98P52948 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
NUP98P52948 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NUP98P52948 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NUP98P52948 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC17.41■□□□□ 0.38
NUP98P52948 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUP98P52948 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
NUP98P52948 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
NUP98P52948 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NUP98P52948 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUP98P52948 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUP98P52948 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUP98P52948 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUP98P52948 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC17.41■□□□□ 0.38
NUP98P52948 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC17.41■□□□□ 0.38
NUP98P52948 IFNWP2-201ENST00000431203 580 ntBASIC17.41■□□□□ 0.38
NUP98P52948 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUP98P52948 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
NUP98P52948 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC17.41■□□□□ 0.38
NUP98P52948 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NUP98P52948 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC17.41■□□□□ 0.38
NUP98P52948 AC005777.1-201ENST00000588332 187 ntBASIC17.41■□□□□ 0.38
NUP98P52948 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUP98P52948 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
NUP98P52948 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NUP98P52948 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.41■□□□□ 0.38
NUP98P52948 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUP98P52948 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NUP98P52948 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUP98P52948 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
NUP98P52948 AL513477.1-201ENST00000602865 2407 ntBASIC17.4■□□□□ 0.38
NUP98P52948 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms