Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 MIR3615-201ENST00000581999 87 ntBASIC14.3□□□□□ -0.12
ZNF140P52738 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.3□□□□□ -0.12
ZNF140P52738 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.3□□□□□ -0.12
ZNF140P52738 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
ZNF140P52738 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
ZNF140P52738 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF140P52738 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ZNF140P52738 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF140P52738 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF140P52738 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF140P52738 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF140P52738 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ZNF140P52738 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF140P52738 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
ZNF140P52738 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
ZNF140P52738 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF140P52738 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF140P52738 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF140P52738 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ZNF140P52738 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.29□□□□□ -0.12
ZNF140P52738 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ZNF140P52738 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ZNF140P52738 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF140P52738 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF140P52738 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.29□□□□□ -0.12
ZNF140P52738 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF140P52738 AC091804.1-201ENST00000486888 567 ntBASIC14.29□□□□□ -0.12
ZNF140P52738 AC092658.1-201ENST00000505836 891 ntBASIC14.29□□□□□ -0.12
ZNF140P52738 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
ZNF140P52738 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF140P52738 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 MIR4538-201ENST00000581377 78 ntBASIC14.29□□□□□ -0.12
ZNF140P52738 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF140P52738 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 MIR6869-201ENST00000619434 62 ntBASIC14.29□□□□□ -0.12
ZNF140P52738 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ZNF140P52738 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF140P52738 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF140P52738 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
ZNF140P52738 LINC01815-202ENST00000641468 1409 ntBASIC14.29□□□□□ -0.12
ZNF140P52738 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ZNF140P52738 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF140P52738 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ZNF140P52738 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF140P52738 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF140P52738 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ZNF140P52738 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF140P52738 AL928654.5-201ENST00000624831 2501 ntBASIC14.29□□□□□ -0.12
ZNF140P52738 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ZNF140P52738 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ZNF140P52738 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF140P52738 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF140P52738 AC010327.5-201ENST00000586923 3061 ntBASIC14.28□□□□□ -0.12
ZNF140P52738 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF140P52738 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF140P52738 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF140P52738 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF140P52738 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF140P52738 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF140P52738 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF140P52738 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF140P52738 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
ZNF140P52738 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF140P52738 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF140P52738 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF140P52738 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF140P52738 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ZNF140P52738 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF140P52738 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF140P52738 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF140P52738 KRT8P21-201ENST00000430398 1491 ntBASIC14.28□□□□□ -0.12
ZNF140P52738 RN7SL277P-201ENST00000481521 288 ntBASIC14.28□□□□□ -0.12
ZNF140P52738 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ZNF140P52738 ZNF767P-206ENST00000513792 565 ntBASIC14.28□□□□□ -0.12
ZNF140P52738 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.28□□□□□ -0.12
ZNF140P52738 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms