Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.85■□□□□ 0.13
CDK7P50613 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC15.85■□□□□ 0.13
CDK7P50613 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC15.85■□□□□ 0.13
CDK7P50613 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC15.85■□□□□ 0.13
CDK7P50613 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.85■□□□□ 0.13
CDK7P50613 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.85■□□□□ 0.13
CDK7P50613 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CDK7P50613 AC021016.3-201ENST00000608367 477 ntBASIC15.85■□□□□ 0.13
CDK7P50613 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.85■□□□□ 0.13
CDK7P50613 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CDK7P50613 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK7P50613 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK7P50613 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK7P50613 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CDK7P50613 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDK7P50613 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK7P50613 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK7P50613 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.85■□□□□ 0.13
CDK7P50613 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK7P50613 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDK7P50613 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC15.85■□□□□ 0.13
CDK7P50613 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK7P50613 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK7P50613 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK7P50613 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDK7P50613 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CDK7P50613 LINC00528-201ENST00000600723 2160 ntBASIC15.85■□□□□ 0.13
CDK7P50613 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.84■□□□□ 0.13
CDK7P50613 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.84■□□□□ 0.13
CDK7P50613 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.84■□□□□ 0.13
CDK7P50613 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 AL591122.2-201ENST00000624125 1853 ntBASIC15.84■□□□□ 0.13
CDK7P50613 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.84■□□□□ 0.13
CDK7P50613 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.84■□□□□ 0.13
CDK7P50613 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.84■□□□□ 0.13
CDK7P50613 AC015688.4-201ENST00000580780 1647 ntBASIC15.84■□□□□ 0.13
CDK7P50613 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CDK7P50613 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CDK7P50613 ACTG1P19-201ENST00000418987 1116 ntBASIC15.84■□□□□ 0.13
CDK7P50613 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC15.84■□□□□ 0.13
CDK7P50613 DDX39AP1-201ENST00000445147 1181 ntBASIC15.84■□□□□ 0.13
CDK7P50613 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CDK7P50613 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC15.84■□□□□ 0.13
CDK7P50613 MIR6746-201ENST00000620971 63 ntBASIC15.84■□□□□ 0.13
CDK7P50613 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
CDK7P50613 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.84■□□□□ 0.13
CDK7P50613 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK7P50613 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.84■□□□□ 0.13
CDK7P50613 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDK7P50613 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
CDK7P50613 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDK7P50613 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDK7P50613 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDK7P50613 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDK7P50613 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CDK7P50613 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDK7P50613 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDK7P50613 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDK7P50613 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.83■□□□□ 0.13
CDK7P50613 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CDK7P50613 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.83■□□□□ 0.12
CDK7P50613 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.83■□□□□ 0.12
CDK7P50613 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK7P50613 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.83■□□□□ 0.12
CDK7P50613 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.83■□□□□ 0.12
CDK7P50613 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDK7P50613 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK7P50613 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK7P50613 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDK7P50613 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDK7P50613 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDK7P50613 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDK7P50613 PPP1R2P4-201ENST00000424051 595 ntBASIC15.83■□□□□ 0.12
CDK7P50613 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.83■□□□□ 0.12
CDK7P50613 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK7P50613 RN7SL564P-201ENST00000496309 250 ntBASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms