Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.68■□□□□ 0.1
PSEN1P49768 AP006547.1-201ENST00000563435 692 ntBASIC15.68■□□□□ 0.1
PSEN1P49768 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC15.68■□□□□ 0.1
PSEN1P49768 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.68■□□□□ 0.1
PSEN1P49768 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.68■□□□□ 0.1
PSEN1P49768 VN1R87P-201ENST00000596706 487 ntBASIC15.68■□□□□ 0.1
PSEN1P49768 AF230666.2-201ENST00000602328 725 ntBASIC15.68■□□□□ 0.1
PSEN1P49768 AC244157.2-201ENST00000616239 1006 ntBASIC15.68■□□□□ 0.1
PSEN1P49768 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC15.68■□□□□ 0.1
PSEN1P49768 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PSEN1P49768 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSEN1P49768 AL358933.1-201ENST00000565046 2830 ntBASIC15.68■□□□□ 0.1
PSEN1P49768 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSEN1P49768 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSEN1P49768 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.68■□□□□ 0.1
PSEN1P49768 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PSEN1P49768 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PSEN1P49768 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.68■□□□□ 0.1
PSEN1P49768 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSEN1P49768 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PSEN1P49768 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSEN1P49768 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
PSEN1P49768 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PSEN1P49768 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
PSEN1P49768 GCNT7-202ENST00000617620 1355 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PSEN1P49768 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.67■□□□□ 0.1
PSEN1P49768 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PSEN1P49768 KRTAP4-3-201ENST00000391356 964 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PSEN1P49768 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
PSEN1P49768 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.67■□□□□ 0.1
PSEN1P49768 AC092810.1-201ENST00000429208 1224 ntBASIC15.67■□□□□ 0.1
PSEN1P49768 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC15.67■□□□□ 0.1
PSEN1P49768 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 AC092658.1-201ENST00000505836 891 ntBASIC15.67■□□□□ 0.1
PSEN1P49768 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.67■□□□□ 0.1
PSEN1P49768 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.67■□□□□ 0.1
PSEN1P49768 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.67■□□□□ 0.1
PSEN1P49768 MIR4741-201ENST00000579822 90 ntBASIC15.67■□□□□ 0.1
PSEN1P49768 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC15.67■□□□□ 0.1
PSEN1P49768 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.67■□□□□ 0.1
PSEN1P49768 AC112503.2-201ENST00000609005 552 ntBASIC15.67■□□□□ 0.1
PSEN1P49768 MIR6799-201ENST00000620297 69 ntBASIC15.67■□□□□ 0.1
PSEN1P49768 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PSEN1P49768 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.67■□□□□ 0.1
PSEN1P49768 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
PSEN1P49768 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PSEN1P49768 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.67■□□□□ 0.1
PSEN1P49768 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSEN1P49768 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
PSEN1P49768 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.67■□□□□ 0.1
PSEN1P49768 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PSEN1P49768 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PSEN1P49768 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSEN1P49768 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC15.66■□□□□ 0.1
PSEN1P49768 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSEN1P49768 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PSEN1P49768 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSEN1P49768 ACE3P-201ENST00000423435 1973 ntBASIC15.66■□□□□ 0.1
PSEN1P49768 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PSEN1P49768 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSEN1P49768 IL6-201ENST00000258743 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSEN1P49768 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.66■□□□□ 0.1
PSEN1P49768 MIR1908-201ENST00000410394 80 ntBASIC15.66■□□□□ 0.1
PSEN1P49768 BTBD6P1-201ENST00000412176 1267 ntBASIC15.66■□□□□ 0.1
PSEN1P49768 CHMP1AP1-201ENST00000445563 662 ntBASIC15.66■□□□□ 0.1
PSEN1P49768 OFD1P3Y-201ENST00000453312 783 ntBASIC15.66■□□□□ 0.1
PSEN1P49768 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.66■□□□□ 0.1
PSEN1P49768 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PSEN1P49768 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PSEN1P49768 FAM86HP-204ENST00000513466 959 ntBASIC15.66■□□□□ 0.1
PSEN1P49768 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms