Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLK1P49759 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLK1P49759 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.7□□□□□ -0.22
CLK1P49759 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLK1P49759 BAATP1-201ENST00000412284 1225 ntBASIC13.7□□□□□ -0.22
CLK1P49759 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.7□□□□□ -0.22
CLK1P49759 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.7□□□□□ -0.22
CLK1P49759 RN7SL692P-201ENST00000464677 288 ntBASIC13.7□□□□□ -0.22
CLK1P49759 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.7□□□□□ -0.22
CLK1P49759 AC022447.6-201ENST00000515522 438 ntBASIC13.7□□□□□ -0.22
CLK1P49759 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLK1P49759 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.7□□□□□ -0.22
CLK1P49759 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.7□□□□□ -0.22
CLK1P49759 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.7□□□□□ -0.22
CLK1P49759 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLK1P49759 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLK1P49759 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLK1P49759 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.7□□□□□ -0.22
CLK1P49759 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLK1P49759 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLK1P49759 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLK1P49759 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLK1P49759 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLK1P49759 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLK1P49759 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLK1P49759 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLK1P49759 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLK1P49759 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLK1P49759 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
CLK1P49759 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CLK1P49759 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.7□□□□□ -0.22
CLK1P49759 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLK1P49759 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLK1P49759 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLK1P49759 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLK1P49759 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.7□□□□□ -0.22
CLK1P49759 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLK1P49759 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLK1P49759 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CLK1P49759 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.69□□□□□ -0.22
CLK1P49759 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.69□□□□□ -0.22
CLK1P49759 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.69□□□□□ -0.22
CLK1P49759 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.69□□□□□ -0.22
CLK1P49759 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.69□□□□□ -0.22
CLK1P49759 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.69□□□□□ -0.22
CLK1P49759 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.69□□□□□ -0.22
CLK1P49759 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 RNU1-114P-201ENST00000365297 166 ntBASIC13.69□□□□□ -0.22
CLK1P49759 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.69□□□□□ -0.22
CLK1P49759 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.69□□□□□ -0.22
CLK1P49759 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLK1P49759 AC012441.1-201ENST00000446669 685 ntBASIC13.69□□□□□ -0.22
CLK1P49759 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.69□□□□□ -0.22
CLK1P49759 TMEM198B-204ENST00000484016 896 ntBASIC13.69□□□□□ -0.22
CLK1P49759 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.69□□□□□ -0.22
CLK1P49759 CR383656.12-201ENST00000549567 513 ntBASIC13.69□□□□□ -0.22
CLK1P49759 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.69□□□□□ -0.22
CLK1P49759 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLK1P49759 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.69□□□□□ -0.22
CLK1P49759 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CLK1P49759 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.69□□□□□ -0.22
CLK1P49759 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLK1P49759 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC13.69□□□□□ -0.22
CLK1P49759 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CLK1P49759 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 LRRC59-203ENST00000576448 1531 ntBASIC13.69□□□□□ -0.22
CLK1P49759 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.69□□□□□ -0.22
CLK1P49759 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLK1P49759 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLK1P49759 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CLK1P49759 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLK1P49759 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLK1P49759 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.68□□□□□ -0.22
CLK1P49759 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CLK1P49759 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLK1P49759 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.68□□□□□ -0.22
CLK1P49759 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLK1P49759 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
CLK1P49759 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLK1P49759 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CLK1P49759 KRT8P35-201ENST00000483942 1338 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms