Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
KDM5CP41229 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC20.91■□□□□ 0.94
KDM5CP41229 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KDM5CP41229 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC20.91■□□□□ 0.94
KDM5CP41229 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC20.91■□□□□ 0.94
KDM5CP41229 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KDM5CP41229 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KDM5CP41229 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KDM5CP41229 AC006328.1-201ENST00000437571 379 ntBASIC20.91■□□□□ 0.94
KDM5CP41229 RPSAP70-201ENST00000504462 864 ntBASIC20.91■□□□□ 0.94
KDM5CP41229 RNA5SP420-201ENST00000516997 137 ntBASIC20.91■□□□□ 0.94
KDM5CP41229 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC20.91■□□□□ 0.94
KDM5CP41229 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC20.91■□□□□ 0.94
KDM5CP41229 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC20.91■□□□□ 0.94
KDM5CP41229 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC20.91■□□□□ 0.94
KDM5CP41229 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC20.91■□□□□ 0.94
KDM5CP41229 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KDM5CP41229 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KDM5CP41229 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC20.91■□□□□ 0.94
KDM5CP41229 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC20.91■□□□□ 0.94
KDM5CP41229 AC011498.7-201ENST00000624986 2027 ntBASIC20.91■□□□□ 0.94
KDM5CP41229 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KDM5CP41229 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KDM5CP41229 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
KDM5CP41229 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
KDM5CP41229 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
KDM5CP41229 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
KDM5CP41229 AC064850.1-201ENST00000413279 1398 ntBASIC20.91■□□□□ 0.94
KDM5CP41229 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC20.9■□□□□ 0.94
KDM5CP41229 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
KDM5CP41229 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
KDM5CP41229 MPV17-209ENST00000405983 859 ntTSL 5 BASIC20.9■□□□□ 0.94
KDM5CP41229 HNRNPA1P25-201ENST00000422644 937 ntBASIC20.9■□□□□ 0.94
KDM5CP41229 AC010086.2-201ENST00000428616 226 ntBASIC20.9■□□□□ 0.94
KDM5CP41229 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KDM5CP41229 RN7SL846P-201ENST00000467429 292 ntBASIC20.9■□□□□ 0.94
KDM5CP41229 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC20.9■□□□□ 0.94
KDM5CP41229 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KDM5CP41229 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KDM5CP41229 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KDM5CP41229 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KDM5CP41229 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KDM5CP41229 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
KDM5CP41229 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
KDM5CP41229 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC20.9■□□□□ 0.94
KDM5CP41229 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
KDM5CP41229 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KDM5CP41229 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KDM5CP41229 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC20.9■□□□□ 0.94
KDM5CP41229 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KDM5CP41229 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KDM5CP41229 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KDM5CP41229 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KDM5CP41229 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
KDM5CP41229 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KDM5CP41229 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
KDM5CP41229 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
KDM5CP41229 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC20.89■□□□□ 0.94
KDM5CP41229 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
KDM5CP41229 AC005722.1-201ENST00000431878 964 ntBASIC20.89■□□□□ 0.94
KDM5CP41229 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KDM5CP41229 RN7SL605P-201ENST00000577229 281 ntBASIC20.89■□□□□ 0.94
KDM5CP41229 PRR20FP-201ENST00000603320 180 ntBASIC20.89■□□□□ 0.94
KDM5CP41229 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC20.89■□□□□ 0.94
KDM5CP41229 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC20.89■□□□□ 0.94
KDM5CP41229 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KDM5CP41229 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KDM5CP41229 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
KDM5CP41229 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC20.89■□□□□ 0.94
KDM5CP41229 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KDM5CP41229 HLF-202ENST00000430986 1385 ntTSL 2 BASIC20.89■□□□□ 0.93
KDM5CP41229 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KDM5CP41229 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KDM5CP41229 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KDM5CP41229 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KDM5CP41229 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
KDM5CP41229 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KDM5CP41229 HPD-204ENST00000543163 1709 ntTSL 5 BASIC20.89■□□□□ 0.93
KDM5CP41229 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KDM5CP41229 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
KDM5CP41229 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
KDM5CP41229 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KDM5CP41229 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
KDM5CP41229 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC20.89■□□□□ 0.93
KDM5CP41229 CCND3P1-201ENST00000438347 580 ntBASIC20.89■□□□□ 0.93
KDM5CP41229 SNRPD2P2-201ENST00000473818 333 ntBASIC20.89■□□□□ 0.93
KDM5CP41229 AC093700.1-201ENST00000503348 717 ntBASIC20.89■□□□□ 0.93
KDM5CP41229 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC20.89■□□□□ 0.93
KDM5CP41229 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC20.89■□□□□ 0.93
KDM5CP41229 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC20.89■□□□□ 0.93
KDM5CP41229 AC006986.1-201ENST00000612764 241 ntBASIC20.89■□□□□ 0.93
KDM5CP41229 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
KDM5CP41229 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KDM5CP41229 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
KDM5CP41229 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
KDM5CP41229 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.88■□□□□ 0.93
KDM5CP41229 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KDM5CP41229 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC20.88■□□□□ 0.93
KDM5CP41229 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KDM5CP41229 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms