Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LTBRP36941 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LTBRP36941 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBRP36941 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
LTBRP36941 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBRP36941 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LTBRP36941 KRT18P33-201ENST00000398525 1043 ntBASIC14.52□□□□□ -0.09
LTBRP36941 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LTBRP36941 PHBP10-201ENST00000416467 784 ntBASIC14.52□□□□□ -0.09
LTBRP36941 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC14.52□□□□□ -0.09
LTBRP36941 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC14.52□□□□□ -0.09
LTBRP36941 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC14.52□□□□□ -0.09
LTBRP36941 SNRPD2P2-201ENST00000473818 333 ntBASIC14.52□□□□□ -0.09
LTBRP36941 AC008494.1-201ENST00000497612 796 ntBASIC14.52□□□□□ -0.09
LTBRP36941 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
LTBRP36941 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LTBRP36941 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
LTBRP36941 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC14.52□□□□□ -0.09
LTBRP36941 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC14.52□□□□□ -0.09
LTBRP36941 RN7SL480P-201ENST00000581481 294 ntBASIC14.52□□□□□ -0.09
LTBRP36941 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.52□□□□□ -0.09
LTBRP36941 AC254633.1-201ENST00000606790 345 ntBASIC14.52□□□□□ -0.09
LTBRP36941 MIR6074-201ENST00000612054 107 ntBASIC14.52□□□□□ -0.09
LTBRP36941 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC14.52□□□□□ -0.09
LTBRP36941 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC14.52□□□□□ -0.09
LTBRP36941 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC14.52□□□□□ -0.09
LTBRP36941 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
LTBRP36941 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBRP36941 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBRP36941 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBRP36941 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBRP36941 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LTBRP36941 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LTBRP36941 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBRP36941 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LTBRP36941 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.52□□□□□ -0.09
LTBRP36941 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.51□□□□□ -0.09
LTBRP36941 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LTBRP36941 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.51□□□□□ -0.09
LTBRP36941 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
LTBRP36941 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 MIR632-201ENST00000385193 94 ntBASIC14.51□□□□□ -0.09
LTBRP36941 MIR1307-201ENST00000408840 149 ntBASIC14.51□□□□□ -0.09
LTBRP36941 HNRNPA1P25-201ENST00000422644 937 ntBASIC14.51□□□□□ -0.09
LTBRP36941 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 PSME2P2-201ENST00000453033 700 ntBASIC14.51□□□□□ -0.09
LTBRP36941 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 KRT18P15-201ENST00000458108 1291 ntBASIC14.51□□□□□ -0.09
LTBRP36941 RN7SL684P-201ENST00000465665 294 ntBASIC14.51□□□□□ -0.09
LTBRP36941 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC14.51□□□□□ -0.09
LTBRP36941 RN7SL523P-201ENST00000484401 298 ntBASIC14.51□□□□□ -0.09
LTBRP36941 AP003040.1-201ENST00000532044 1024 ntBASIC14.51□□□□□ -0.09
LTBRP36941 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC14.51□□□□□ -0.09
LTBRP36941 FAM187B2P-201ENST00000577135 713 ntBASIC14.51□□□□□ -0.09
LTBRP36941 RN7SL440P-201ENST00000577855 343 ntBASIC14.51□□□□□ -0.09
LTBRP36941 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC14.51□□□□□ -0.09
LTBRP36941 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC14.51□□□□□ -0.09
LTBRP36941 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC14.51□□□□□ -0.09
LTBRP36941 AC020922.4-201ENST00000621389 339 ntBASIC14.51□□□□□ -0.09
LTBRP36941 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.51□□□□□ -0.09
LTBRP36941 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LTBRP36941 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.51□□□□□ -0.09
LTBRP36941 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LTBRP36941 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.51□□□□□ -0.09
LTBRP36941 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.51□□□□□ -0.09
LTBRP36941 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBRP36941 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.51□□□□□ -0.09
LTBRP36941 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.5□□□□□ -0.09
LTBRP36941 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LTBRP36941 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.5□□□□□ -0.09
LTBRP36941 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LTBRP36941 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LTBRP36941 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LTBRP36941 Z98885.3-201ENST00000624882 1757 ntBASIC14.5□□□□□ -0.09
LTBRP36941 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LTBRP36941 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LTBRP36941 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LTBRP36941 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
LTBRP36941 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LTBRP36941 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
LTBRP36941 RNA5SP491-201ENST00000362936 118 ntBASIC14.5□□□□□ -0.09
LTBRP36941 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LTBRP36941 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms