Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC10.68□□□□□ -0.7
CKS2P33552 AC004461.2-201ENST00000629517 803 ntBASIC10.68□□□□□ -0.7
CKS2P33552 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC10.68□□□□□ -0.7
CKS2P33552 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC10.68□□□□□ -0.7
CKS2P33552 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
CKS2P33552 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC10.68□□□□□ -0.7
CKS2P33552 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CKS2P33552 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
CKS2P33552 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 AC022497.1-201ENST00000624916 3691 ntBASIC10.68□□□□□ -0.7
CKS2P33552 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC10.68□□□□□ -0.7
CKS2P33552 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS2P33552 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
CKS2P33552 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC10.67□□□□□ -0.7
CKS2P33552 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC10.67□□□□□ -0.7
CKS2P33552 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
CKS2P33552 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 AP000437.1-201ENST00000624057 2085 ntBASIC10.67□□□□□ -0.7
CKS2P33552 RERG-209ENST00000546331 1383 ntTSL 2 BASIC10.67□□□□□ -0.7
CKS2P33552 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.67□□□□□ -0.7
CKS2P33552 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
CKS2P33552 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
CKS2P33552 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
CKS2P33552 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
CKS2P33552 TLE1P1-201ENST00000422965 589 ntBASIC10.67□□□□□ -0.7
CKS2P33552 AC136604.1-202ENST00000425471 771 ntBASIC10.67□□□□□ -0.7
CKS2P33552 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC10.67□□□□□ -0.7
CKS2P33552 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 RNA5SP419-201ENST00000515908 135 ntBASIC10.67□□□□□ -0.7
CKS2P33552 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC10.67□□□□□ -0.7
CKS2P33552 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
CKS2P33552 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC10.67□□□□□ -0.7
CKS2P33552 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC10.67□□□□□ -0.7
CKS2P33552 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
CKS2P33552 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC10.67□□□□□ -0.7
CKS2P33552 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
CKS2P33552 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
CKS2P33552 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
CKS2P33552 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
CKS2P33552 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC10.67□□□□□ -0.7
CKS2P33552 AGAP12P-201ENST00000585227 2359 ntBASIC10.67□□□□□ -0.7
CKS2P33552 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
CKS2P33552 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CKS2P33552 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC10.67□□□□□ -0.7
CKS2P33552 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CKS2P33552 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CKS2P33552 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CKS2P33552 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CKS2P33552 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CKS2P33552 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
CKS2P33552 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC10.66□□□□□ -0.7
CKS2P33552 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CKS2P33552 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC10.66□□□□□ -0.7
CKS2P33552 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
CKS2P33552 LINC02486-201ENST00000604157 3000 ntBASIC10.66□□□□□ -0.7
CKS2P33552 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CKS2P33552 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC10.66□□□□□ -0.7
CKS2P33552 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC10.66□□□□□ -0.7
CKS2P33552 AC125807.2-201ENST00000513358 3514 ntBASIC10.66□□□□□ -0.7
CKS2P33552 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC10.66□□□□□ -0.7
CKS2P33552 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CKS2P33552 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms