Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.21□□□□□ -0.45
COL8A2P25067 ELK2AP-201ENST00000392510 1007 ntBASIC12.21□□□□□ -0.45
COL8A2P25067 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.21□□□□□ -0.45
COL8A2P25067 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.21□□□□□ -0.45
COL8A2P25067 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.21□□□□□ -0.45
COL8A2P25067 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.21□□□□□ -0.45
COL8A2P25067 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.21□□□□□ -0.45
COL8A2P25067 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.21□□□□□ -0.45
COL8A2P25067 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.21□□□□□ -0.45
COL8A2P25067 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.21□□□□□ -0.45
COL8A2P25067 AC008723.1-201ENST00000506922 207 ntBASIC12.21□□□□□ -0.45
COL8A2P25067 IGLV3-15-201ENST00000518356 244 ntBASIC12.21□□□□□ -0.45
COL8A2P25067 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC12.21□□□□□ -0.45
COL8A2P25067 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.21□□□□□ -0.45
COL8A2P25067 AC242376.1-201ENST00000559033 726 ntBASIC12.21□□□□□ -0.45
COL8A2P25067 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.21□□□□□ -0.45
COL8A2P25067 AC026803.1-201ENST00000569130 274 ntBASIC12.21□□□□□ -0.45
COL8A2P25067 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC12.21□□□□□ -0.45
COL8A2P25067 MIR3188-201ENST00000583494 85 ntBASIC12.21□□□□□ -0.45
COL8A2P25067 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
COL8A2P25067 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.21□□□□□ -0.45
COL8A2P25067 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.21□□□□□ -0.45
COL8A2P25067 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.21□□□□□ -0.45
COL8A2P25067 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.21□□□□□ -0.45
COL8A2P25067 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 AGGF1P1-201ENST00000509500 2073 ntBASIC12.21□□□□□ -0.45
COL8A2P25067 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COL8A2P25067 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
COL8A2P25067 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
COL8A2P25067 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
COL8A2P25067 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.21□□□□□ -0.46
COL8A2P25067 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
COL8A2P25067 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
COL8A2P25067 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.21□□□□□ -0.46
COL8A2P25067 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
COL8A2P25067 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
COL8A2P25067 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
COL8A2P25067 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.46
COL8A2P25067 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
COL8A2P25067 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
COL8A2P25067 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
COL8A2P25067 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
COL8A2P25067 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.21□□□□□ -0.46
COL8A2P25067 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
COL8A2P25067 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
COL8A2P25067 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
COL8A2P25067 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
COL8A2P25067 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.21□□□□□ -0.46
COL8A2P25067 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.2□□□□□ -0.46
COL8A2P25067 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
COL8A2P25067 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
COL8A2P25067 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
COL8A2P25067 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
COL8A2P25067 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
COL8A2P25067 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.2□□□□□ -0.46
COL8A2P25067 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.2□□□□□ -0.46
COL8A2P25067 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.2□□□□□ -0.46
COL8A2P25067 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.2□□□□□ -0.46
COL8A2P25067 AC026320.2-201ENST00000434379 478 ntBASIC12.2□□□□□ -0.46
COL8A2P25067 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.2□□□□□ -0.46
COL8A2P25067 AC234782.1-201ENST00000451950 919 ntBASIC12.2□□□□□ -0.46
COL8A2P25067 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.2□□□□□ -0.46
COL8A2P25067 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.2□□□□□ -0.46
COL8A2P25067 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
COL8A2P25067 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
COL8A2P25067 AL109837.1-201ENST00000603272 613 ntBASIC12.2□□□□□ -0.46
COL8A2P25067 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.2□□□□□ -0.46
COL8A2P25067 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.2□□□□□ -0.46
COL8A2P25067 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.2□□□□□ -0.46
COL8A2P25067 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
COL8A2P25067 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
COL8A2P25067 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms