Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 MBP-201ENST00000354542 575 ntTSL 2 BASIC11.33□□□□□ -0.6
CD28P10747 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 LBH-202ENST00000401506 485 ntTSL 3 BASIC11.33□□□□□ -0.6
CD28P10747 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
CD28P10747 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC11.33□□□□□ -0.6
CD28P10747 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC11.33□□□□□ -0.6
CD28P10747 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC11.33□□□□□ -0.6
CD28P10747 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC11.33□□□□□ -0.6
CD28P10747 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC11.33□□□□□ -0.6
CD28P10747 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.33□□□□□ -0.6
CD28P10747 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC11.33□□□□□ -0.6
CD28P10747 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC11.33□□□□□ -0.6
CD28P10747 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC11.33□□□□□ -0.6
CD28P10747 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC11.33□□□□□ -0.6
CD28P10747 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC11.33□□□□□ -0.6
CD28P10747 AC051619.9-201ENST00000623237 597 ntBASIC11.33□□□□□ -0.6
CD28P10747 AL805961.1-201ENST00000642026 753 ntBASIC11.33□□□□□ -0.6
CD28P10747 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.33□□□□□ -0.6
CD28P10747 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CD28P10747 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
CD28P10747 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11.33□□□□□ -0.6
CD28P10747 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
CD28P10747 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC11.33□□□□□ -0.6
CD28P10747 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.33□□□□□ -0.6
CD28P10747 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CD28P10747 AL590440.2-201ENST00000641973 1595 ntBASIC11.33□□□□□ -0.6
CD28P10747 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.33□□□□□ -0.6
CD28P10747 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CD28P10747 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CD28P10747 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
CD28P10747 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC11.32□□□□□ -0.6
CD28P10747 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.32□□□□□ -0.6
CD28P10747 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC11.32□□□□□ -0.6
CD28P10747 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CD28P10747 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CD28P10747 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CD28P10747 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC11.32□□□□□ -0.6
CD28P10747 AC131212.3-201ENST00000624087 4219 ntBASIC11.32□□□□□ -0.6
CD28P10747 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CD28P10747 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CD28P10747 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
CD28P10747 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CD28P10747 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC11.32□□□□□ -0.6
CD28P10747 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
CD28P10747 AC015688.4-201ENST00000580780 1647 ntBASIC11.32□□□□□ -0.6
CD28P10747 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CD28P10747 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
CD28P10747 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CD28P10747 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CD28P10747 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CD28P10747 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CD28P10747 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CD28P10747 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CD28P10747 RNA5SP359-201ENST00000364838 113 ntBASIC11.32□□□□□ -0.6
CD28P10747 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.32□□□□□ -0.6
CD28P10747 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC11.32□□□□□ -0.6
CD28P10747 AP000356.3-201ENST00000382243 753 ntBASIC11.32□□□□□ -0.6
CD28P10747 AL583805.1-201ENST00000391389 531 ntBASIC11.32□□□□□ -0.6
CD28P10747 IGF1-203ENST00000392904 761 ntTSL 5 BASIC11.32□□□□□ -0.6
CD28P10747 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC11.32□□□□□ -0.6
CD28P10747 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC11.32□□□□□ -0.6
CD28P10747 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC11.32□□□□□ -0.6
CD28P10747 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC11.32□□□□□ -0.6
CD28P10747 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
CD28P10747 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC11.32□□□□□ -0.6
CD28P10747 MIR3677-201ENST00000578964 60 ntBASIC11.32□□□□□ -0.6
CD28P10747 MIR3188-201ENST00000583494 85 ntBASIC11.32□□□□□ -0.6
CD28P10747 WDR7-208ENST00000589935 544 ntTSL 4 BASIC11.32□□□□□ -0.6
CD28P10747 AC103810.10-201ENST00000606504 343 ntBASIC11.32□□□□□ -0.6
CD28P10747 AC018635.2-201ENST00000608625 364 ntBASIC11.32□□□□□ -0.6
CD28P10747 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC11.32□□□□□ -0.6
CD28P10747 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC11.32□□□□□ -0.6
CD28P10747 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
CD28P10747 AC006504.5-208ENST00000588784 2401 ntBASIC11.32□□□□□ -0.6
CD28P10747 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.32□□□□□ -0.6
CD28P10747 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CD28P10747 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CD28P10747 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CD28P10747 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CD28P10747 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms