Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SP9P0CG40 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SP9P0CG40 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SP9P0CG40 AL137077.2-201ENST00000635124 1608 ntBASIC13.89□□□□□ -0.19
SP9P0CG40 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.89□□□□□ -0.19
SP9P0CG40 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SP9P0CG40 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SP9P0CG40 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SP9P0CG40 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.89□□□□□ -0.19
SP9P0CG40 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SP9P0CG40 AC064801.2-201ENST00000625052 1303 ntBASIC13.89□□□□□ -0.19
SP9P0CG40 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SP9P0CG40 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.88□□□□□ -0.19
SP9P0CG40 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SP9P0CG40 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.88□□□□□ -0.19
SP9P0CG40 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SP9P0CG40 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.88□□□□□ -0.19
SP9P0CG40 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.88□□□□□ -0.19
SP9P0CG40 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
SP9P0CG40 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.88□□□□□ -0.19
SP9P0CG40 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.88□□□□□ -0.19
SP9P0CG40 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SP9P0CG40 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC13.88□□□□□ -0.19
SP9P0CG40 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC13.88□□□□□ -0.19
SP9P0CG40 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC13.88□□□□□ -0.19
SP9P0CG40 AL954722.1-201ENST00000431238 259 ntBASIC13.88□□□□□ -0.19
SP9P0CG40 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC13.88□□□□□ -0.19
SP9P0CG40 RN7SL684P-201ENST00000465665 294 ntBASIC13.88□□□□□ -0.19
SP9P0CG40 AC112250.1-201ENST00000504640 745 ntBASIC13.88□□□□□ -0.19
SP9P0CG40 AP003040.1-201ENST00000532044 1024 ntBASIC13.88□□□□□ -0.19
SP9P0CG40 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC13.88□□□□□ -0.19
SP9P0CG40 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
SP9P0CG40 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC13.88□□□□□ -0.19
SP9P0CG40 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC13.88□□□□□ -0.19
SP9P0CG40 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 RN7SL478P-201ENST00000584358 298 ntBASIC13.88□□□□□ -0.19
SP9P0CG40 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.88□□□□□ -0.19
SP9P0CG40 PRR20FP-201ENST00000603320 180 ntBASIC13.88□□□□□ -0.19
SP9P0CG40 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
SP9P0CG40 OR3A1-202ENST00000615105 966 ntBASIC13.88□□□□□ -0.19
SP9P0CG40 AC009041.4-201ENST00000620075 638 ntBASIC13.88□□□□□ -0.19
SP9P0CG40 MEP1AP1-201ENST00000636082 1097 ntBASIC13.88□□□□□ -0.19
SP9P0CG40 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SP9P0CG40 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.88□□□□□ -0.19
SP9P0CG40 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.88□□□□□ -0.19
SP9P0CG40 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SP9P0CG40 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SP9P0CG40 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SP9P0CG40 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.87□□□□□ -0.19
SP9P0CG40 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
SP9P0CG40 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SP9P0CG40 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SP9P0CG40 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SP9P0CG40 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SP9P0CG40 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
SP9P0CG40 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SP9P0CG40 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.87□□□□□ -0.19
SP9P0CG40 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.87□□□□□ -0.19
SP9P0CG40 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC13.87□□□□□ -0.19
SP9P0CG40 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SP9P0CG40 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SP9P0CG40 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SP9P0CG40 U73169.1-201ENST00000395152 367 ntBASIC13.87□□□□□ -0.19
SP9P0CG40 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC13.87□□□□□ -0.19
SP9P0CG40 AC010086.2-201ENST00000428616 226 ntBASIC13.87□□□□□ -0.19
SP9P0CG40 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC13.87□□□□□ -0.19
SP9P0CG40 RPL18AP15-201ENST00000430258 517 ntBASIC13.87□□□□□ -0.19
SP9P0CG40 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SP9P0CG40 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC13.87□□□□□ -0.19
SP9P0CG40 AC022447.5-201ENST00000504817 392 ntBASIC13.87□□□□□ -0.19
SP9P0CG40 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.87□□□□□ -0.19
SP9P0CG40 AC023051.2-201ENST00000541141 460 ntBASIC13.87□□□□□ -0.19
SP9P0CG40 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC13.87□□□□□ -0.19
SP9P0CG40 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC13.87□□□□□ -0.19
SP9P0CG40 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SP9P0CG40 MIR8071-1-201ENST00000616769 65 ntBASIC13.87□□□□□ -0.19
SP9P0CG40 MIR8071-2-201ENST00000616772 65 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms