Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.94□□□□□ -0.02
CD48P09326 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 KRT18P36-201ENST00000411618 1276 ntBASIC14.94□□□□□ -0.02
CD48P09326 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 FAM21FP-201ENST00000426241 1131 ntBASIC14.94□□□□□ -0.02
CD48P09326 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.94□□□□□ -0.02
CD48P09326 GOLGA2P4-201ENST00000441462 777 ntBASIC14.94□□□□□ -0.02
CD48P09326 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CD48P09326 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.94□□□□□ -0.02
CD48P09326 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.94□□□□□ -0.02
CD48P09326 SCARNA21-201ENST00000517026 139 ntBASIC14.94□□□□□ -0.02
CD48P09326 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.94□□□□□ -0.02
CD48P09326 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.94□□□□□ -0.02
CD48P09326 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.94□□□□□ -0.02
CD48P09326 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.94□□□□□ -0.02
CD48P09326 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.94□□□□□ -0.02
CD48P09326 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CD48P09326 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
CD48P09326 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
CD48P09326 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
CD48P09326 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.94□□□□□ -0.02
CD48P09326 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.94□□□□□ -0.02
CD48P09326 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.94□□□□□ -0.02
CD48P09326 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CD48P09326 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.93□□□□□ -0.02
CD48P09326 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CD48P09326 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CD48P09326 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CD48P09326 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CD48P09326 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.93□□□□□ -0.02
CD48P09326 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CD48P09326 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CD48P09326 Z93015.1-201ENST00000451718 390 ntBASIC14.93□□□□□ -0.02
CD48P09326 RPL18P13-201ENST00000478088 569 ntBASIC14.93□□□□□ -0.02
CD48P09326 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 FAM86HP-204ENST00000513466 959 ntBASIC14.93□□□□□ -0.02
CD48P09326 RNA5SP412-201ENST00000516234 123 ntBASIC14.93□□□□□ -0.02
CD48P09326 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.93□□□□□ -0.02
CD48P09326 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.93□□□□□ -0.02
CD48P09326 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 RN7SL560P-201ENST00000577943 264 ntBASIC14.93□□□□□ -0.02
CD48P09326 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.93□□□□□ -0.02
CD48P09326 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
CD48P09326 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.93□□□□□ -0.02
CD48P09326 AC021016.3-201ENST00000608367 477 ntBASIC14.93□□□□□ -0.02
CD48P09326 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.93□□□□□ -0.02
CD48P09326 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CD48P09326 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 AC005014.1-201ENST00000432006 2976 ntBASIC14.93□□□□□ -0.02
CD48P09326 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CD48P09326 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CD48P09326 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CD48P09326 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CD48P09326 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD48P09326 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CD48P09326 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CD48P09326 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms