Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 E2F3P2-201ENST00000447755 1422 ntBASIC13.34□□□□□ -0.27
THBS1P07996 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
THBS1P07996 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.34□□□□□ -0.27
THBS1P07996 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.34□□□□□ -0.27
THBS1P07996 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
THBS1P07996 FAM58BP-201ENST00000439056 645 ntBASIC13.34□□□□□ -0.27
THBS1P07996 ST13P19-201ENST00000442505 1124 ntBASIC13.34□□□□□ -0.27
THBS1P07996 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.34□□□□□ -0.27
THBS1P07996 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
THBS1P07996 RNA5SP412-201ENST00000516234 123 ntBASIC13.34□□□□□ -0.27
THBS1P07996 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.34□□□□□ -0.27
THBS1P07996 RBM8B-201ENST00000555532 525 ntBASIC13.34□□□□□ -0.27
THBS1P07996 AC009955.4-201ENST00000597192 544 ntBASIC13.34□□□□□ -0.27
THBS1P07996 AC021016.3-201ENST00000608367 477 ntBASIC13.34□□□□□ -0.27
THBS1P07996 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.34□□□□□ -0.27
THBS1P07996 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.34□□□□□ -0.27
THBS1P07996 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.34□□□□□ -0.27
THBS1P07996 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
THBS1P07996 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.34□□□□□ -0.27
THBS1P07996 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.34□□□□□ -0.27
THBS1P07996 LAP3P2-201ENST00000454686 1454 ntBASIC13.34□□□□□ -0.27
THBS1P07996 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
THBS1P07996 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.34□□□□□ -0.27
THBS1P07996 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.34□□□□□ -0.27
THBS1P07996 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
THBS1P07996 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.33□□□□□ -0.27
THBS1P07996 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
THBS1P07996 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.33□□□□□ -0.27
THBS1P07996 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.33□□□□□ -0.27
THBS1P07996 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
THBS1P07996 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS1P07996 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS1P07996 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.33□□□□□ -0.28
THBS1P07996 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
THBS1P07996 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS1P07996 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS1P07996 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
THBS1P07996 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS1P07996 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS1P07996 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
THBS1P07996 FAM86MP-201ENST00000340703 885 ntBASIC13.33□□□□□ -0.28
THBS1P07996 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
THBS1P07996 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
THBS1P07996 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS1P07996 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.33□□□□□ -0.28
THBS1P07996 AC079178.1-201ENST00000420915 656 ntBASIC13.33□□□□□ -0.28
THBS1P07996 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
THBS1P07996 ACTBP11-201ENST00000436287 1126 ntBASIC13.33□□□□□ -0.28
THBS1P07996 KLF2P4-201ENST00000451959 1225 ntBASIC13.33□□□□□ -0.28
THBS1P07996 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
THBS1P07996 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
THBS1P07996 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.33□□□□□ -0.28
THBS1P07996 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.33□□□□□ -0.28
THBS1P07996 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.33□□□□□ -0.28
THBS1P07996 KRT18P8-201ENST00000581937 1246 ntBASIC13.33□□□□□ -0.28
THBS1P07996 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.33□□□□□ -0.28
THBS1P07996 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
THBS1P07996 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC13.33□□□□□ -0.28
THBS1P07996 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.33□□□□□ -0.28
THBS1P07996 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
THBS1P07996 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
THBS1P07996 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.33□□□□□ -0.28
THBS1P07996 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.33□□□□□ -0.28
THBS1P07996 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS1P07996 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
THBS1P07996 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
THBS1P07996 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
THBS1P07996 TUBB1P2-201ENST00000422712 1306 ntBASIC13.33□□□□□ -0.28
THBS1P07996 TUBB1P1-201ENST00000503144 1300 ntBASIC13.33□□□□□ -0.28
THBS1P07996 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.33□□□□□ -0.28
THBS1P07996 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS1P07996 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
THBS1P07996 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
THBS1P07996 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.33□□□□□ -0.28
THBS1P07996 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS1P07996 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
THBS1P07996 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
THBS1P07996 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
THBS1P07996 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.32□□□□□ -0.28
THBS1P07996 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.32□□□□□ -0.28
THBS1P07996 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms