Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.68□□□□□ -0.38
SFTPBP07988 BCRP6-201ENST00000510112 632 ntBASIC12.68□□□□□ -0.38
SFTPBP07988 BCRP7-201ENST00000511549 544 ntBASIC12.68□□□□□ -0.38
SFTPBP07988 AC068587.3-201ENST00000526613 355 ntBASIC12.68□□□□□ -0.38
SFTPBP07988 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.68□□□□□ -0.38
SFTPBP07988 PTP4A1P2-201ENST00000546033 454 ntBASIC12.68□□□□□ -0.38
SFTPBP07988 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.68□□□□□ -0.38
SFTPBP07988 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.68□□□□□ -0.38
SFTPBP07988 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.68□□□□□ -0.38
SFTPBP07988 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 AC004466.1-201ENST00000599515 1080 ntBASIC12.68□□□□□ -0.38
SFTPBP07988 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SFTPBP07988 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SFTPBP07988 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.68□□□□□ -0.38
SFTPBP07988 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.68□□□□□ -0.38
SFTPBP07988 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.68□□□□□ -0.38
SFTPBP07988 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.68□□□□□ -0.38
SFTPBP07988 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
SFTPBP07988 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.67□□□□□ -0.38
SFTPBP07988 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.67□□□□□ -0.38
SFTPBP07988 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
SFTPBP07988 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 AC118758.2-201ENST00000614242 2813 ntBASIC12.67□□□□□ -0.38
SFTPBP07988 AC012617.1-204ENST00000586340 2305 ntBASIC12.67□□□□□ -0.38
SFTPBP07988 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.67□□□□□ -0.38
SFTPBP07988 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 CSPG4P11-201ENST00000560634 4910 ntBASIC12.67□□□□□ -0.38
SFTPBP07988 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SFTPBP07988 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.67□□□□□ -0.38
SFTPBP07988 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SFTPBP07988 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SFTPBP07988 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
SFTPBP07988 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 MIR1909-201ENST00000411312 80 ntBASIC12.67□□□□□ -0.38
SFTPBP07988 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 TLE1P1-201ENST00000422965 589 ntBASIC12.67□□□□□ -0.38
SFTPBP07988 KRT43P-201ENST00000434019 910 ntBASIC12.67□□□□□ -0.38
SFTPBP07988 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SFTPBP07988 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.67□□□□□ -0.38
SFTPBP07988 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SFTPBP07988 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.67□□□□□ -0.38
SFTPBP07988 AP001063.1-201ENST00000568332 529 ntBASIC12.67□□□□□ -0.38
SFTPBP07988 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.67□□□□□ -0.38
SFTPBP07988 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.67□□□□□ -0.38
SFTPBP07988 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.67□□□□□ -0.38
SFTPBP07988 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.67□□□□□ -0.38
SFTPBP07988 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SFTPBP07988 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.67□□□□□ -0.38
SFTPBP07988 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SFTPBP07988 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SFTPBP07988 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SFTPBP07988 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SFTPBP07988 AC092053.3-201ENST00000641308 4975 ntBASIC12.66□□□□□ -0.38
SFTPBP07988 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SFTPBP07988 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SFTPBP07988 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.66□□□□□ -0.38
SFTPBP07988 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SFTPBP07988 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms