Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.03□□□□□ -0.32
SPTA1P02549 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPTA1P02549 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPTA1P02549 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPTA1P02549 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SPTA1P02549 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPTA1P02549 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.03□□□□□ -0.32
SPTA1P02549 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SPTA1P02549 BRD7P5-201ENST00000299197 1822 ntBASIC13.03□□□□□ -0.32
SPTA1P02549 GEMIN8P4-201ENST00000380526 729 ntBASIC13.03□□□□□ -0.32
SPTA1P02549 AC098657.1-201ENST00000416270 1135 ntBASIC13.03□□□□□ -0.32
SPTA1P02549 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC13.03□□□□□ -0.32
SPTA1P02549 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC13.03□□□□□ -0.32
SPTA1P02549 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SPTA1P02549 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC13.03□□□□□ -0.32
SPTA1P02549 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.03□□□□□ -0.32
SPTA1P02549 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SPTA1P02549 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.03□□□□□ -0.32
SPTA1P02549 APOC1-209ENST00000592885 562 ntTSL 3 BASIC13.03□□□□□ -0.32
SPTA1P02549 AP006248.1-201ENST00000610471 67 ntBASIC13.03□□□□□ -0.32
SPTA1P02549 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.03□□□□□ -0.32
SPTA1P02549 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPTA1P02549 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPTA1P02549 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SPTA1P02549 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
SPTA1P02549 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPTA1P02549 FLJ16779-201ENST00000612722 7638 ntBASIC13.03□□□□□ -0.32
SPTA1P02549 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC13.03□□□□□ -0.32
SPTA1P02549 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPTA1P02549 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.03□□□□□ -0.32
SPTA1P02549 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPTA1P02549 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPTA1P02549 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC13.03□□□□□ -0.32
SPTA1P02549 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.03□□□□□ -0.32
SPTA1P02549 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SPTA1P02549 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SPTA1P02549 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SPTA1P02549 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SPTA1P02549 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SPTA1P02549 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SPTA1P02549 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.32
SPTA1P02549 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SPTA1P02549 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.02□□□□□ -0.32
SPTA1P02549 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.02□□□□□ -0.32
SPTA1P02549 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SPTA1P02549 AC092580.1-201ENST00000433998 658 ntBASIC13.02□□□□□ -0.32
SPTA1P02549 MAGEA7P-201ENST00000436482 942 ntBASIC13.02□□□□□ -0.32
SPTA1P02549 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.02□□□□□ -0.32
SPTA1P02549 SLC25A15P1-201ENST00000456738 342 ntBASIC13.02□□□□□ -0.32
SPTA1P02549 SLC25A15P3-201ENST00000505530 290 ntBASIC13.02□□□□□ -0.32
SPTA1P02549 CASP3-205ENST00000517513 964 ntTSL 5 BASIC13.02□□□□□ -0.32
SPTA1P02549 F11R-204ENST00000537746 1245 ntTSL 2 BASIC13.02□□□□□ -0.32
SPTA1P02549 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC13.02□□□□□ -0.32
SPTA1P02549 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.02□□□□□ -0.32
SPTA1P02549 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SPTA1P02549 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SPTA1P02549 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SPTA1P02549 AC097376.2-205ENST00000610159 5334 ntBASIC13.02□□□□□ -0.32
SPTA1P02549 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.02□□□□□ -0.32
SPTA1P02549 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SPTA1P02549 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SPTA1P02549 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SPTA1P02549 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SPTA1P02549 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SPTA1P02549 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPTA1P02549 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPTA1P02549 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.02□□□□□ -0.33
SPTA1P02549 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPTA1P02549 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.02□□□□□ -0.33
SPTA1P02549 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.02□□□□□ -0.33
SPTA1P02549 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SPTA1P02549 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPTA1P02549 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.02□□□□□ -0.33
SPTA1P02549 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPTA1P02549 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC13.02□□□□□ -0.33
SPTA1P02549 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SPTA1P02549 AC026412.1-206ENST00000502273 206 ntBASIC13.02□□□□□ -0.33
SPTA1P02549 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.02□□□□□ -0.33
SPTA1P02549 AC021321.1-201ENST00000607397 1113 ntBASIC13.02□□□□□ -0.33
SPTA1P02549 AL359091.4-201ENST00000610052 409 ntBASIC13.02□□□□□ -0.33
SPTA1P02549 AC004466.2-201ENST00000614749 516 ntBASIC13.02□□□□□ -0.33
SPTA1P02549 AC020922.4-201ENST00000621389 339 ntBASIC13.02□□□□□ -0.33
SPTA1P02549 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.02□□□□□ -0.33
SPTA1P02549 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.02□□□□□ -0.33
SPTA1P02549 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPTA1P02549 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPTA1P02549 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPTA1P02549 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.02□□□□□ -0.33
SPTA1P02549 FUCA1P1-201ENST00000374476 1351 ntBASIC13.02□□□□□ -0.33
SPTA1P02549 KRT8P28-201ENST00000433288 1390 ntBASIC13.02□□□□□ -0.33
SPTA1P02549 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPTA1P02549 INTS4P1-203ENST00000641008 3683 ntBASIC13.02□□□□□ -0.33
SPTA1P02549 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPTA1P02549 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.02□□□□□ -0.33
SPTA1P02549 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPTA1P02549 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPTA1P02549 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SPTA1P02549 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPTA1P02549 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPTA1P02549 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms