Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 KRT18P13-201ENST00000400056 1290 ntBASIC12.48□□□□□ -0.41
HLA-DQB1P01920 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 TSEN15P1-201ENST00000423257 515 ntBASIC12.48□□□□□ -0.41
HLA-DQB1P01920 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 EIF3FP3-201ENST00000434851 1086 ntBASIC12.48□□□□□ -0.41
HLA-DQB1P01920 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 FAM86LP-201ENST00000478302 853 ntBASIC12.48□□□□□ -0.41
HLA-DQB1P01920 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 AC092865.5-201ENST00000545435 363 ntBASIC12.48□□□□□ -0.41
HLA-DQB1P01920 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 AC134684.3-201ENST00000641758 218 ntBASIC12.48□□□□□ -0.41
HLA-DQB1P01920 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.48□□□□□ -0.41
HLA-DQB1P01920 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 SHC1P1-201ENST00000425230 1745 ntBASIC12.48□□□□□ -0.41
HLA-DQB1P01920 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DQB1P01920 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 AC027369.3-201ENST00000530465 3707 ntBASIC12.47□□□□□ -0.41
HLA-DQB1P01920 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 AC131212.3-201ENST00000624087 4219 ntBASIC12.47□□□□□ -0.41
HLA-DQB1P01920 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 LINC00567-201ENST00000569854 3409 ntBASIC12.47□□□□□ -0.41
HLA-DQB1P01920 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 RN7SKP230-201ENST00000365642 335 ntBASIC12.47□□□□□ -0.41
HLA-DQB1P01920 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 AC107890.1-201ENST00000422478 521 ntBASIC12.47□□□□□ -0.41
HLA-DQB1P01920 AC092580.3-201ENST00000430932 139 ntBASIC12.47□□□□□ -0.41
HLA-DQB1P01920 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 GIMAP3P-201ENST00000495150 836 ntBASIC12.47□□□□□ -0.41
HLA-DQB1P01920 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.47□□□□□ -0.41
HLA-DQB1P01920 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms