Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF40O75150 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF40O75150 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF40O75150 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.74■□□□□ 0.11
RNF40O75150 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RNF40O75150 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF40O75150 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF40O75150 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF40O75150 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF40O75150 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RNF40O75150 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF40O75150 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF40O75150 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF40O75150 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF40O75150 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF40O75150 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF40O75150 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RNF40O75150 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF40O75150 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF40O75150 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF40O75150 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF40O75150 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
RNF40O75150 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF40O75150 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF40O75150 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RNF40O75150 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF40O75150 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF40O75150 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
RNF40O75150 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF40O75150 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
RNF40O75150 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RNF40O75150 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF40O75150 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
RNF40O75150 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF40O75150 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF40O75150 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF40O75150 RNA5SP486-201ENST00000515961 83 ntBASIC15.73■□□□□ 0.11
RNF40O75150 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF40O75150 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF40O75150 AL391001.1-201ENST00000602747 715 ntBASIC15.73■□□□□ 0.11
RNF40O75150 AC132938.4-201ENST00000623835 848 ntBASIC15.73■□□□□ 0.11
RNF40O75150 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF40O75150 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF40O75150 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RNF40O75150 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RNF40O75150 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF40O75150 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RNF40O75150 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF40O75150 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF40O75150 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
RNF40O75150 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RNF40O75150 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF40O75150 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RNF40O75150 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF40O75150 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
RNF40O75150 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.72■□□□□ 0.11
RNF40O75150 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RNF40O75150 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RNF40O75150 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.72■□□□□ 0.11
RNF40O75150 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RNF40O75150 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RNF40O75150 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 AL591846.1-201ENST00000451736 433 ntBASIC15.72■□□□□ 0.11
RNF40O75150 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RNF40O75150 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms