Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.61□□□□□ -0.23
HCN1O60741 CLUHP2-201ENST00000426660 1303 ntBASIC13.61□□□□□ -0.23
HCN1O60741 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.61□□□□□ -0.23
HCN1O60741 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HCN1O60741 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HCN1O60741 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HCN1O60741 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.6□□□□□ -0.23
HCN1O60741 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.6□□□□□ -0.23
HCN1O60741 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.6□□□□□ -0.23
HCN1O60741 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.6□□□□□ -0.23
HCN1O60741 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.6□□□□□ -0.23
HCN1O60741 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HCN1O60741 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HCN1O60741 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.6□□□□□ -0.23
HCN1O60741 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.6□□□□□ -0.23
HCN1O60741 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.6□□□□□ -0.23
HCN1O60741 AC007969.1-201ENST00000433675 447 ntBASIC13.6□□□□□ -0.23
HCN1O60741 AL023775.1-201ENST00000454907 1746 ntBASIC13.6□□□□□ -0.23
HCN1O60741 KRT8P13-201ENST00000463294 1010 ntBASIC13.6□□□□□ -0.23
HCN1O60741 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 AC026434.2-201ENST00000506094 1078 ntBASIC13.6□□□□□ -0.23
HCN1O60741 AL391280.1-201ENST00000506969 1062 ntBASIC13.6□□□□□ -0.23
HCN1O60741 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.6□□□□□ -0.23
HCN1O60741 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
HCN1O60741 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HCN1O60741 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.6□□□□□ -0.23
HCN1O60741 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.6□□□□□ -0.23
HCN1O60741 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.6□□□□□ -0.23
HCN1O60741 AL118558.3-201ENST00000607414 1079 ntBASIC13.6□□□□□ -0.23
HCN1O60741 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.6□□□□□ -0.23
HCN1O60741 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
HCN1O60741 AC099521.3-201ENST00000624251 2938 ntBASIC13.6□□□□□ -0.23
HCN1O60741 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.6□□□□□ -0.23
HCN1O60741 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HCN1O60741 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.6□□□□□ -0.23
HCN1O60741 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCN1O60741 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.59□□□□□ -0.23
HCN1O60741 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
HCN1O60741 AL133338.1-201ENST00000565695 1517 ntBASIC13.59□□□□□ -0.23
HCN1O60741 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HCN1O60741 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
HCN1O60741 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.59□□□□□ -0.23
HCN1O60741 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.59□□□□□ -0.23
HCN1O60741 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HCN1O60741 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
HCN1O60741 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
HCN1O60741 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 MIR1247-201ENST00000408206 136 ntBASIC13.59□□□□□ -0.23
HCN1O60741 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HCN1O60741 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.59□□□□□ -0.23
HCN1O60741 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.59□□□□□ -0.23
HCN1O60741 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.59□□□□□ -0.23
HCN1O60741 POM121L10P-201ENST00000436994 1285 ntBASIC13.59□□□□□ -0.23
HCN1O60741 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
HCN1O60741 AC104306.2-201ENST00000451877 341 ntBASIC13.59□□□□□ -0.23
HCN1O60741 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.59□□□□□ -0.23
HCN1O60741 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCN1O60741 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms