Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 RNF146-211ENST00000609447 607 ntTSL 4 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 CTBP2P8-201ENST00000422584 1330 ntBASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 FAM90A21P-201ENST00000510875 1396 ntBASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 FAM90A15P-201ENST00000514465 1395 ntBASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 FAM90A6P-201ENST00000515148 1394 ntBASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 FAM90A16P-201ENST00000526662 1395 ntBASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 FAM90A9P-201ENST00000527940 1395 ntBASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 FAM90A5P-201ENST00000528738 1395 ntBASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 FAM90A14P-201ENST00000530386 1395 ntBASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 FAM90A13P-201ENST00000534703 1395 ntBASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 AC026410.1-201ENST00000507366 1101 ntBASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 RNA5SP406-201ENST00000516106 112 ntBASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 LINC00244-201ENST00000625073 613 ntBASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.61□□□□□ -0.23
CCDC187A0A096LP49 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms