Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 RN7SL818P-201ENST00000485099 259 ntBASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 AC003686.1-201ENST00000550956 1034 ntBASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 AC013355.1-201ENST00000562625 723 ntBASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 RN7SL725P-201ENST00000606439 259 ntBASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 HSPA7-201ENST00000445535 1927 ntBASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 KRT18P36-201ENST00000411618 1276 ntBASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 FTLP1-201ENST00000449155 526 ntBASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 AC021016.3-201ENST00000608367 477 ntBASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 AC018629.1-201ENST00000623381 1736 ntBASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAI2Q9Y5P3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 XBP1P1-201ENST00000436573 652 ntBASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 MAGEA5-201ENST00000446757 942 ntBASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 AC008267.1-201ENST00000474858 1069 ntBASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 PGAM1P5-201ENST00000548011 764 ntBASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 AP001505.2-201ENST00000616815 443 ntBASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 AC092299.1-201ENST00000632679 757 ntBASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 AHCYP4-201ENST00000419201 1315 ntBASIC14.62□□□□□ -0.07
RAI2Q9Y5P3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms