Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 TNRC18P2-201ENST00000417666 2714 ntBASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 AC113367.3-201ENST00000508316 1912 ntBASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CLCF1Q9UBD9 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.83□□□□□ -0.35
CLCF1Q9UBD9 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CLCF1Q9UBD9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CLCF1Q9UBD9 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.83□□□□□ -0.35
CLCF1Q9UBD9 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 CAP2P1-201ENST00000557743 1390 ntBASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 KRT8P31-201ENST00000504812 1408 ntBASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 UFM1-202ENST00000379649 846 ntTSL 4 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 RPL8P2-201ENST00000430538 502 ntBASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 RPSAP15-201ENST00000448168 861 ntBASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 FTLP1-201ENST00000449155 526 ntBASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 AL353726.2-201ENST00000623259 884 ntBASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 KRT18P9-201ENST00000604826 1300 ntBASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.83□□□□□ -0.36
CLCF1Q9UBD9 CICP24-201ENST00000605464 2705 ntBASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 AC067750.1-201ENST00000608826 6545 ntBASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 MIR557-201ENST00000385239 98 ntBASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLCF1Q9UBD9 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms