Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRFN1Q9P244 AC091046.1-201ENST00000331871 207 ntBASIC13.29□□□□□ -0.28
LRFN1Q9P244 RNA5SP359-201ENST00000364838 113 ntBASIC13.29□□□□□ -0.28
LRFN1Q9P244 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRFN1Q9P244 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRFN1Q9P244 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 PRKXP1-201ENST00000561423 1122 ntBASIC13.29□□□□□ -0.28
LRFN1Q9P244 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 AC026803.1-201ENST00000569130 274 ntBASIC13.29□□□□□ -0.28
LRFN1Q9P244 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRFN1Q9P244 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRFN1Q9P244 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRFN1Q9P244 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRFN1Q9P244 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRFN1Q9P244 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRFN1Q9P244 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRFN1Q9P244 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRFN1Q9P244 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRFN1Q9P244 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRFN1Q9P244 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.29□□□□□ -0.28
LRFN1Q9P244 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRFN1Q9P244 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 CICP14-201ENST00000629111 2732 ntBASIC13.28□□□□□ -0.28
LRFN1Q9P244 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 TMEM198B-204ENST00000484016 896 ntBASIC13.28□□□□□ -0.28
LRFN1Q9P244 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 AL591471.1-201ENST00000621855 229 ntBASIC13.28□□□□□ -0.28
LRFN1Q9P244 AC128714.1-201ENST00000637035 887 ntBASIC13.28□□□□□ -0.28
LRFN1Q9P244 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 MYADML-201ENST00000474610 2147 ntBASIC13.28□□□□□ -0.28
LRFN1Q9P244 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 MTHFR-210ENST00000641407 2387 ntBASIC13.28□□□□□ -0.28
LRFN1Q9P244 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRFN1Q9P244 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms