Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 USP32P1-208ENST00000506594 1164 ntBASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 AP001889.1-201ENST00000525414 633 ntBASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 SLC25A47P1-201ENST00000531577 414 ntBASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 TUBB8P4-201ENST00000511806 1324 ntBASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIN7CQ9NUP9 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 BOLA2P3-201ENST00000404566 256 ntBASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 EIF3FP3-201ENST00000434851 1086 ntBASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 GCOM2-201ENST00000509133 1104 ntBASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 AL138725.1-201ENST00000407347 1314 ntBASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIN7CQ9NUP9 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms