Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 STK25-235ENST00000543554 2556 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 DLX4-206ENST00000611342 1662 ntBASIC11.78□□□□□ -0.52
RAB40CQ96S21 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 LRRC59-203ENST00000576448 1531 ntBASIC11.78□□□□□ -0.52
RAB40CQ96S21 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 PNMT-202ENST00000394246 821 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 TREML5P-201ENST00000421694 576 ntBASIC11.78□□□□□ -0.52
RAB40CQ96S21 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 AC092183.1-201ENST00000469884 875 ntBASIC11.78□□□□□ -0.52
RAB40CQ96S21 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 AC097493.3-201ENST00000509725 367 ntBASIC11.78□□□□□ -0.52
RAB40CQ96S21 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 RARRES2P5-201ENST00000564013 466 ntBASIC11.78□□□□□ -0.52
RAB40CQ96S21 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 AL158211.3-201ENST00000607385 239 ntBASIC11.78□□□□□ -0.52
RAB40CQ96S21 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 Z82170.1-201ENST00000625081 3192 ntBASIC11.78□□□□□ -0.52
RAB40CQ96S21 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB40CQ96S21 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC11.78□□□□□ -0.52
RAB40CQ96S21 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RAB40CQ96S21 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
RAB40CQ96S21 PCDHB18P-202ENST00000526308 3197 ntBASIC11.77□□□□□ -0.52
RAB40CQ96S21 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RAB40CQ96S21 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.52
RAB40CQ96S21 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC11.77□□□□□ -0.52
RAB40CQ96S21 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
RAB40CQ96S21 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RAB40CQ96S21 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
RAB40CQ96S21 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC11.77□□□□□ -0.52
RAB40CQ96S21 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
RAB40CQ96S21 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
RAB40CQ96S21 RNU1-114P-201ENST00000365297 166 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms