Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 MIR8072-201ENST00000614241 80 ntBASIC12.9□□□□□ -0.34
RFT1Q96AA3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
RFT1Q96AA3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.9□□□□□ -0.35
RFT1Q96AA3 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
RFT1Q96AA3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
RFT1Q96AA3 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
RFT1Q96AA3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 AGAP10P-201ENST00000454844 2418 ntBASIC12.89□□□□□ -0.35
RFT1Q96AA3 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 RNU1-114P-201ENST00000365297 166 ntBASIC12.89□□□□□ -0.35
RFT1Q96AA3 AL645937.2-201ENST00000396808 931 ntBASIC12.89□□□□□ -0.35
RFT1Q96AA3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 RPL13AP25-201ENST00000484130 612 ntBASIC12.89□□□□□ -0.35
RFT1Q96AA3 AC120045.2-201ENST00000567334 178 ntBASIC12.89□□□□□ -0.35
RFT1Q96AA3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 AC005498.2-205ENST00000593218 784 ntBASIC12.89□□□□□ -0.35
RFT1Q96AA3 AC093813.1-201ENST00000605066 256 ntBASIC12.89□□□□□ -0.35
RFT1Q96AA3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 AP002761.4-201ENST00000565433 3361 ntBASIC12.89□□□□□ -0.35
RFT1Q96AA3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFT1Q96AA3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RFT1Q96AA3 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFT1Q96AA3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RFT1Q96AA3 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms