Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC097359.2-201ENST00000604992 2389 ntBASIC15.31■□□□□ 0.04
ATP2A3Q93084 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP2A3Q93084 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP2A3Q93084 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP2A3Q93084 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP2A3Q93084 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP2A3Q93084 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.3■□□□□ 0.04
ATP2A3Q93084 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 SALL4P5-201ENST00000419001 1760 ntBASIC15.3■□□□□ 0.04
ATP2A3Q93084 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP2A3Q93084 AC006335.1-201ENST00000445200 547 ntBASIC15.3■□□□□ 0.04
ATP2A3Q93084 MAGEA5-201ENST00000446757 942 ntBASIC15.3■□□□□ 0.04
ATP2A3Q93084 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATP2A3Q93084 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 FGFR3P5-201ENST00000564496 886 ntBASIC15.3■□□□□ 0.04
ATP2A3Q93084 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 AC008805.1-201ENST00000590892 364 ntBASIC15.3■□□□□ 0.04
ATP2A3Q93084 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 AL008718.2-201ENST00000609206 1313 ntBASIC15.3■□□□□ 0.04
ATP2A3Q93084 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ATP2A3Q93084 NAP1L6-202ENST00000641404 1222 ntBASIC15.3■□□□□ 0.04
ATP2A3Q93084 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP2A3Q93084 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP2A3Q93084 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP2A3Q93084 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP2A3Q93084 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATP2A3Q93084 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 AC244394.1-201ENST00000435000 1665 ntBASIC15.29■□□□□ 0.04
ATP2A3Q93084 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 RN7SKP214-201ENST00000364208 315 ntBASIC15.29■□□□□ 0.04
ATP2A3Q93084 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 AC012618.1-201ENST00000461223 412 ntBASIC15.29■□□□□ 0.04
ATP2A3Q93084 NUP210P1-202ENST00000504322 710 ntBASIC15.29■□□□□ 0.04
ATP2A3Q93084 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATP2A3Q93084 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ATP2A3Q93084 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms