Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 AC100757.4-201ENST00000626934 759 ntBASIC16.25■□□□□ 0.19
TNFRSF25Q93038 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 AC068760.1-201ENST00000493579 1953 ntBASIC16.25■□□□□ 0.19
TNFRSF25Q93038 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF25Q93038 AL157791.1-201ENST00000553667 1699 ntBASIC16.24■□□□□ 0.19
TNFRSF25Q93038 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 FNTAP2-201ENST00000430308 634 ntBASIC16.24■□□□□ 0.19
TNFRSF25Q93038 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 RN7SL530P-201ENST00000485097 298 ntBASIC16.24■□□□□ 0.19
TNFRSF25Q93038 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 RN7SL455P-201ENST00000580629 282 ntBASIC16.24■□□□□ 0.19
TNFRSF25Q93038 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.24■□□□□ 0.19
TNFRSF25Q93038 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF25Q93038 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 AC015909.3-201ENST00000572855 1794 ntBASIC16.23■□□□□ 0.19
TNFRSF25Q93038 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 GOLGA2P8-201ENST00000505201 779 ntBASIC16.23■□□□□ 0.19
TNFRSF25Q93038 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 MIR4525-201ENST00000580000 75 ntBASIC16.23■□□□□ 0.19
TNFRSF25Q93038 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 GPR182-203ENST00000622922 591 ntBASIC16.23■□□□□ 0.19
TNFRSF25Q93038 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 NAP1L6-202ENST00000641404 1222 ntBASIC16.23■□□□□ 0.19
TNFRSF25Q93038 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 AC068587.6-202ENST00000641839 5619 ntBASIC16.23■□□□□ 0.19
TNFRSF25Q93038 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TNFRSF25Q93038 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms