Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 AC064801.2-201ENST00000625052 1303 ntBASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 RNU1-114P-201ENST00000365297 166 ntBASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 EIF3FP3-201ENST00000434851 1086 ntBASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 SRD5A3P1-201ENST00000603021 949 ntBASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 Z92544.3-201ENST00000624747 417 ntBASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3IL1Q8TBN0 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 AL590440.2-201ENST00000641973 1595 ntBASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 FAM86GP-201ENST00000448322 971 ntBASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 AC125807.1-201ENST00000483097 614 ntBASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 AC140878.1-201ENST00000565277 250 ntBASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RAB3IL1Q8TBN0 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms