Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.69□□□□□ -0.38
CPEB3Q8NE35 AL161932.2-201ENST00000435436 679 ntBASIC12.69□□□□□ -0.38
CPEB3Q8NE35 FAM58BP-201ENST00000439056 645 ntBASIC12.69□□□□□ -0.38
CPEB3Q8NE35 AC012441.2-201ENST00000444843 739 ntBASIC12.69□□□□□ -0.38
CPEB3Q8NE35 AL591846.1-201ENST00000451736 433 ntBASIC12.69□□□□□ -0.38
CPEB3Q8NE35 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 AC005586.2-201ENST00000563946 837 ntBASIC12.69□□□□□ -0.38
CPEB3Q8NE35 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 AC005962.1-201ENST00000584100 773 ntBASIC12.69□□□□□ -0.38
CPEB3Q8NE35 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 AC009884.2-201ENST00000603110 324 ntBASIC12.69□□□□□ -0.38
CPEB3Q8NE35 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CPEB3Q8NE35 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 AC064801.2-201ENST00000625052 1303 ntBASIC12.68□□□□□ -0.38
CPEB3Q8NE35 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 RNMTL1P1-201ENST00000454103 560 ntBASIC12.68□□□□□ -0.38
CPEB3Q8NE35 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.68□□□□□ -0.38
CPEB3Q8NE35 AC021723.1-201ENST00000486306 515 ntBASIC12.68□□□□□ -0.38
CPEB3Q8NE35 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 RBM8B-201ENST00000555532 525 ntBASIC12.68□□□□□ -0.38
CPEB3Q8NE35 AL160314.3-201ENST00000556041 767 ntBASIC12.68□□□□□ -0.38
CPEB3Q8NE35 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CPEB3Q8NE35 AC104982.3-201ENST00000581995 514 ntBASIC12.68□□□□□ -0.38
CPEB3Q8NE35 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms