Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 MIR6727-201ENST00000620702 65 ntBASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 AC092299.1-201ENST00000632679 757 ntBASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 PGAM1P5-201ENST00000548011 764 ntBASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 AC013355.1-201ENST00000562625 723 ntBASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 AC018629.1-201ENST00000623381 1736 ntBASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 AL928921.2-201ENST00000641325 2442 ntBASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
SCUBE3Q8IX30 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCUBE3Q8IX30 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms