Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13CQ709C8 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13CQ709C8 AC006987.1-201ENST00000413610 527 ntBASIC11.62□□□□□ -0.55
VPS13CQ709C8 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 RN7SL478P-201ENST00000584358 298 ntBASIC11.62□□□□□ -0.55
VPS13CQ709C8 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC11.62□□□□□ -0.55
VPS13CQ709C8 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC11.62□□□□□ -0.55
VPS13CQ709C8 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC11.62□□□□□ -0.55
VPS13CQ709C8 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13CQ709C8 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
VPS13CQ709C8 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 KRT8P38-201ENST00000441370 1430 ntBASIC11.61□□□□□ -0.55
VPS13CQ709C8 AC020763.4-201ENST00000623414 4170 ntBASIC11.61□□□□□ -0.55
VPS13CQ709C8 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 RN7SL33P-201ENST00000462543 342 ntBASIC11.61□□□□□ -0.55
VPS13CQ709C8 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 AP005264.5-201ENST00000590066 467 ntBASIC11.61□□□□□ -0.55
VPS13CQ709C8 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 AC132812.1-201ENST00000583145 892 ntBASIC11.61□□□□□ -0.55
VPS13CQ709C8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 RPSAP6-201ENST00000417882 882 ntBASIC11.61□□□□□ -0.55
VPS13CQ709C8 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 HNRNPA1P21-201ENST00000424115 961 ntBASIC11.61□□□□□ -0.55
VPS13CQ709C8 AC092573.1-201ENST00000433054 884 ntBASIC11.61□□□□□ -0.55
VPS13CQ709C8 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 ACY3-202ENST00000529256 933 ntTSL 3 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13CQ709C8 AC120498.7-201ENST00000562876 330 ntBASIC11.61□□□□□ -0.55
VPS13CQ709C8 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC11.61□□□□□ -0.55
VPS13CQ709C8 AC002350.2-201ENST00000623894 1828 ntBASIC11.6□□□□□ -0.55
VPS13CQ709C8 PES1P2-201ENST00000449745 1735 ntBASIC11.6□□□□□ -0.55
VPS13CQ709C8 HSPA8P5-201ENST00000456928 2069 ntBASIC11.6□□□□□ -0.55
VPS13CQ709C8 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
VPS13CQ709C8 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13CQ709C8 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13CQ709C8 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13CQ709C8 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
VPS13CQ709C8 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13CQ709C8 KRT18P33-201ENST00000398525 1043 ntBASIC11.6□□□□□ -0.55
VPS13CQ709C8 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC11.6□□□□□ -0.55
VPS13CQ709C8 RN7SL440P-201ENST00000577855 343 ntBASIC11.6□□□□□ -0.55
VPS13CQ709C8 KF455155.1-201ENST00000604493 303 ntBASIC11.6□□□□□ -0.55
VPS13CQ709C8 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
VPS13CQ709C8 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.6□□□□□ -0.55
VPS13CQ709C8 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
VPS13CQ709C8 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13CQ709C8 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC11.6□□□□□ -0.55
VPS13CQ709C8 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
VPS13CQ709C8 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
VPS13CQ709C8 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VPS13CQ709C8 RBPMSLP-201ENST00000433427 502 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms