Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 RFNG-202ENST00000429557 994 ntTSL 5 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 RPL29P2-201ENST00000488409 460 ntBASIC13.75□□□□□ -0.21
RIF1Q5UIP0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 MIR4309-201ENST00000582498 83 ntBASIC13.75□□□□□ -0.21
RIF1Q5UIP0 AC148476.1-201ENST00000622182 705 ntBASIC13.75□□□□□ -0.21
RIF1Q5UIP0 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 AC022532.1-201ENST00000624563 1728 ntBASIC13.74□□□□□ -0.21
RIF1Q5UIP0 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 MIR181D-201ENST00000384853 137 ntBASIC13.74□□□□□ -0.21
RIF1Q5UIP0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 HNRNPA1P73-201ENST00000446472 928 ntBASIC13.74□□□□□ -0.21
RIF1Q5UIP0 ALDOAP1-201ENST00000491506 1078 ntBASIC13.74□□□□□ -0.21
RIF1Q5UIP0 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 AC092115.1-201ENST00000566277 1402 ntBASIC13.74□□□□□ -0.21
RIF1Q5UIP0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RIF1Q5UIP0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 RPSAP6-201ENST00000417882 882 ntBASIC13.73□□□□□ -0.21
RIF1Q5UIP0 BAK1P2-201ENST00000532665 631 ntBASIC13.73□□□□□ -0.21
RIF1Q5UIP0 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 AC026336.4-201ENST00000624565 1050 ntBASIC13.73□□□□□ -0.21
RIF1Q5UIP0 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 RBP4-203ENST00000371469 814 ntTSL 5 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms