Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 CCL19-202ENST00000378800 414 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 B9D1-206ENST00000461069 923 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 RN7SL478P-201ENST00000584358 298 ntBASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 AC023157.3-201ENST00000619086 2088 ntBASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 RN7SL846P-201ENST00000467429 292 ntBASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 AC098657.1-201ENST00000416270 1135 ntBASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 PGK1P2-201ENST00000431702 1214 ntBASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 UGT1A12P-201ENST00000447084 853 ntBASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 AC022447.5-201ENST00000504817 392 ntBASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 EMP3-204ENST00000596315 761 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 MIR8071-1-201ENST00000616769 65 ntBASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 MIR8071-2-201ENST00000616772 65 ntBASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 MEP1AP1-201ENST00000636082 1097 ntBASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 AC023824.1-201ENST00000562945 2975 ntBASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 PSME2P2-201ENST00000453033 700 ntBASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 AC254633.1-201ENST00000606790 345 ntBASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 AC002350.2-201ENST00000623894 1828 ntBASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 AL157832.2-205ENST00000597245 1649 ntBASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 AC008021.1-201ENST00000474180 414 ntBASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 AC090820.1-201ENST00000519722 591 ntBASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 MBP-230ENST00000528160 584 ntTSL 5 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC9.3□□□□□ -0.92
VPS13DQ5THJ4 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13DQ5THJ4 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms