Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 AC013355.1-201ENST00000562625 723 ntBASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 BAP1-211ENST00000615113 489 ntBASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 AGAP10P-201ENST00000454844 2418 ntBASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 AL359881.3-201ENST00000602640 1721 ntBASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN20Q4JDL3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 PFN1P12-201ENST00000455938 534 ntBASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 TMEM198B-204ENST00000484016 896 ntBASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 AC106794.1-201ENST00000506935 792 ntBASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 AL132994.2-201ENST00000603120 687 ntBASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 AL118558.3-201ENST00000607414 1079 ntBASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 AL157813.1-201ENST00000612996 587 ntBASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PTPN20Q4JDL3 AC010327.5-201ENST00000586923 3061 ntBASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms