Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC27Q2M243 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC27Q2M243 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC27Q2M243 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC27Q2M243 AK2P2-201ENST00000439142 405 ntBASIC18.66■□□□□ 0.58
CCDC27Q2M243 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 AL161670.2-201ENST00000557650 1227 ntBASIC18.66■□□□□ 0.58
CCDC27Q2M243 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC27Q2M243 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC27Q2M243 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC27Q2M243 AGAP10P-201ENST00000454844 2418 ntBASIC18.65■□□□□ 0.58
CCDC27Q2M243 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC27Q2M243 RCC2P1-201ENST00000452257 1476 ntBASIC18.65■□□□□ 0.58
CCDC27Q2M243 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC27Q2M243 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 BAX-205ENST00000391871 687 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC27Q2M243 CYP46A4P-201ENST00000414953 267 ntBASIC18.65■□□□□ 0.58
CCDC27Q2M243 OR8T1P-201ENST00000421347 918 ntBASIC18.65■□□□□ 0.58
CCDC27Q2M243 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.65■□□□□ 0.58
CCDC27Q2M243 DUX4L50-201ENST00000455245 715 ntBASIC18.65■□□□□ 0.58
CCDC27Q2M243 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC27Q2M243 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC27Q2M243 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC27Q2M243 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CCDC27Q2M243 FRMPD2B-201ENST00000431305 1347 ntBASIC18.65■□□□□ 0.58
CCDC27Q2M243 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC27Q2M243 DUT-208ENST00000559540 1441 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC27Q2M243 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC27Q2M243 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC27Q2M243 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC27Q2M243 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
CCDC27Q2M243 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC18.64■□□□□ 0.58
CCDC27Q2M243 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CCDC27Q2M243 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC27Q2M243 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC27Q2M243 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC27Q2M243 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC27Q2M243 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC27Q2M243 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC27Q2M243 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC27Q2M243 CHCHD2P2-201ENST00000503744 321 ntBASIC18.64■□□□□ 0.57
CCDC27Q2M243 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC27Q2M243 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC27Q2M243 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CCDC27Q2M243 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC27Q2M243 AC103810.3-201ENST00000583567 96 ntBASIC18.64■□□□□ 0.57
CCDC27Q2M243 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC27Q2M243 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC27Q2M243 TUBB4AP1-201ENST00000450755 1325 ntBASIC18.64■□□□□ 0.57
CCDC27Q2M243 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC27Q2M243 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC27Q2M243 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC27Q2M243 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC27Q2M243 AC008132.1-202ENST00000342005 1389 ntBASIC18.64■□□□□ 0.57
CCDC27Q2M243 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC27Q2M243 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC27Q2M243 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC27Q2M243 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CCDC27Q2M243 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC27Q2M243 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC27Q2M243 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCDC27Q2M243 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC27Q2M243 AC015909.3-201ENST00000572855 1794 ntBASIC18.63■□□□□ 0.57
CCDC27Q2M243 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms