Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 PRMT1P1-201ENST00000604252 1009 ntBASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 SSR4P1-203ENST00000599569 2260 ntBASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 HLA-DMA-202ENST00000395303 1007 ntBASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 OR52M2P-201ENST00000414298 959 ntBASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 B9D1-206ENST00000461069 923 ntTSL 2 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 DPY19L2P4-201ENST00000479881 442 ntBASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 RN7SKP155-201ENST00000516031 288 ntBASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 AC004923.3-201ENST00000527532 355 ntBASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 RN7SL605P-201ENST00000577229 281 ntBASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 AC132812.1-201ENST00000583145 892 ntBASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 AC005777.1-201ENST00000588332 187 ntBASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 AC244517.3-201ENST00000616254 1235 ntBASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 AL591471.1-201ENST00000621855 229 ntBASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 AC007952.5-201ENST00000572818 1486 ntBASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO4Q2I0M5 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
RSPO4Q2I0M5 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
RSPO4Q2I0M5 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
RSPO4Q2I0M5 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.83□□□□□ -0.19
RSPO4Q2I0M5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.83□□□□□ -0.19
RSPO4Q2I0M5 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
RSPO4Q2I0M5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.83□□□□□ -0.19
RSPO4Q2I0M5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 AC009093.10-201ENST00000641956 1442 ntBASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO4Q2I0M5 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms