Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP7AQ04656 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.67■□□□□ 0.9
ATP7AQ04656 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP7AQ04656 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP7AQ04656 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP7AQ04656 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP7AQ04656 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP7AQ04656 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP7AQ04656 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP7AQ04656 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP7AQ04656 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP7AQ04656 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP7AQ04656 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP7AQ04656 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP7AQ04656 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP7AQ04656 AL121949.3-201ENST00000406684 385 ntBASIC20.67■□□□□ 0.9
ATP7AQ04656 CD37-203ENST00000426897 1204 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP7AQ04656 CCND3P1-201ENST00000438347 580 ntBASIC20.67■□□□□ 0.9
ATP7AQ04656 AL773545.2-201ENST00000442149 472 ntBASIC20.67■□□□□ 0.9
ATP7AQ04656 RN7SL578P-201ENST00000477781 283 ntBASIC20.67■□□□□ 0.9
ATP7AQ04656 AP003040.1-201ENST00000532044 1024 ntBASIC20.67■□□□□ 0.9
ATP7AQ04656 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC20.67■□□□□ 0.9
ATP7AQ04656 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP7AQ04656 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC20.67■□□□□ 0.9
ATP7AQ04656 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP7AQ04656 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP7AQ04656 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP7AQ04656 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP7AQ04656 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP7AQ04656 AC008620.2-201ENST00000510294 1569 ntBASIC20.66■□□□□ 0.9
ATP7AQ04656 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP7AQ04656 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP7AQ04656 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP7AQ04656 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP7AQ04656 HSPA8P5-201ENST00000456928 2069 ntBASIC20.66■□□□□ 0.9
ATP7AQ04656 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP7AQ04656 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
ATP7AQ04656 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP7AQ04656 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATP7AQ04656 MIR632-201ENST00000385193 94 ntBASIC20.66■□□□□ 0.9
ATP7AQ04656 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP7AQ04656 AC010900.1-201ENST00000449849 1296 ntBASIC20.66■□□□□ 0.9
ATP7AQ04656 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC20.66■□□□□ 0.9
ATP7AQ04656 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP7AQ04656 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC20.66■□□□□ 0.9
ATP7AQ04656 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC20.66■□□□□ 0.9
ATP7AQ04656 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC20.66■□□□□ 0.9
ATP7AQ04656 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC20.66■□□□□ 0.9
ATP7AQ04656 AC132812.1-201ENST00000583145 892 ntBASIC20.66■□□□□ 0.9
ATP7AQ04656 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP7AQ04656 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ATP7AQ04656 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP7AQ04656 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC20.66■□□□□ 0.9
ATP7AQ04656 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP7AQ04656 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ATP7AQ04656 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP7AQ04656 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC20.65■□□□□ 0.9
ATP7AQ04656 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP7AQ04656 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ATP7AQ04656 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ATP7AQ04656 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP7AQ04656 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP7AQ04656 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
ATP7AQ04656 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ATP7AQ04656 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP7AQ04656 RPL29P2-202ENST00000498671 657 ntBASIC20.65■□□□□ 0.9
ATP7AQ04656 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC20.65■□□□□ 0.9
ATP7AQ04656 GRAMD4P6-201ENST00000556999 244 ntBASIC20.65■□□□□ 0.9
ATP7AQ04656 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC20.65■□□□□ 0.9
ATP7AQ04656 RN7SL134P-201ENST00000579756 303 ntBASIC20.65■□□□□ 0.9
ATP7AQ04656 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC20.65■□□□□ 0.9
ATP7AQ04656 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP7AQ04656 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.65■□□□□ 0.9
ATP7AQ04656 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC20.65■□□□□ 0.9
ATP7AQ04656 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP7AQ04656 NRADDP-202ENST00000641269 1585 ntBASIC20.65■□□□□ 0.9
ATP7AQ04656 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC20.65■□□□□ 0.9
ATP7AQ04656 AL050341.2-201ENST00000567508 1541 ntBASIC20.65■□□□□ 0.9
ATP7AQ04656 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP7AQ04656 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP7AQ04656 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
ATP7AQ04656 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP7AQ04656 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP7AQ04656 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP7AQ04656 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATP7AQ04656 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATP7AQ04656 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATP7AQ04656 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC20.64■□□□□ 0.9
ATP7AQ04656 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC20.64■□□□□ 0.9
ATP7AQ04656 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATP7AQ04656 AC092910.2-201ENST00000491262 348 ntBASIC20.64■□□□□ 0.9
ATP7AQ04656 AC099328.1-201ENST00000498809 1030 ntBASIC20.64■□□□□ 0.9
ATP7AQ04656 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATP7AQ04656 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC20.64■□□□□ 0.9
ATP7AQ04656 USP39-207ENST00000450066 2086 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP7AQ04656 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ATP7AQ04656 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.64■□□□□ 0.89
ATP7AQ04656 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP7AQ04656 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP7AQ04656 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms