Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3F3AP84243 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H3F3AP84243 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3F3AP84243 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3F3AP84243 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3F3AP84243 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
H3F3AP84243 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3F3AP84243 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H3F3AP84243 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.93□□□□□ -0.34
H3F3AP84243 OR2R1P-201ENST00000441404 914 ntBASIC12.93□□□□□ -0.34
H3F3AP84243 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.93□□□□□ -0.34
H3F3AP84243 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
H3F3AP84243 AC044849.1-201ENST00000519737 1188 ntBASIC12.93□□□□□ -0.34
H3F3AP84243 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.93□□□□□ -0.34
H3F3AP84243 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.93□□□□□ -0.34
H3F3AP84243 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3F3AP84243 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.93□□□□□ -0.34
H3F3AP84243 AC013355.1-201ENST00000562625 723 ntBASIC12.93□□□□□ -0.34
H3F3AP84243 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.93□□□□□ -0.34
H3F3AP84243 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
H3F3AP84243 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.93□□□□□ -0.34
H3F3AP84243 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.93□□□□□ -0.34
H3F3AP84243 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3F3AP84243 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3F3AP84243 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
H3F3AP84243 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
H3F3AP84243 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.93□□□□□ -0.34
H3F3AP84243 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
H3F3AP84243 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
H3F3AP84243 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
H3F3AP84243 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.93□□□□□ -0.34
H3F3AP84243 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3F3AP84243 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H3F3AP84243 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.92□□□□□ -0.34
H3F3AP84243 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 AC005252.3-201ENST00000623855 2258 ntBASIC12.92□□□□□ -0.34
H3F3AP84243 TUBB8P4-201ENST00000511806 1324 ntBASIC12.92□□□□□ -0.34
H3F3AP84243 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.92□□□□□ -0.34
H3F3AP84243 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.92□□□□□ -0.34
H3F3AP84243 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
H3F3AP84243 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.92□□□□□ -0.34
H3F3AP84243 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.92□□□□□ -0.34
H3F3AP84243 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.92□□□□□ -0.34
H3F3AP84243 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.92□□□□□ -0.34
H3F3AP84243 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
H3F3AP84243 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 AC091804.1-201ENST00000486888 567 ntBASIC12.92□□□□□ -0.34
H3F3AP84243 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
H3F3AP84243 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.92□□□□□ -0.34
H3F3AP84243 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.92□□□□□ -0.34
H3F3AP84243 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.92□□□□□ -0.34
H3F3AP84243 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.92□□□□□ -0.34
H3F3AP84243 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.92□□□□□ -0.34
H3F3AP84243 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.92□□□□□ -0.34
H3F3AP84243 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 AL591471.1-201ENST00000621855 229 ntBASIC12.92□□□□□ -0.34
H3F3AP84243 AC018629.1-201ENST00000623381 1736 ntBASIC12.92□□□□□ -0.34
H3F3AP84243 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.92□□□□□ -0.34
H3F3AP84243 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
H3F3AP84243 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
H3F3AP84243 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.92□□□□□ -0.34
H3F3AP84243 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.92□□□□□ -0.34
H3F3AP84243 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.92□□□□□ -0.34
H3F3AP84243 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
H3F3AP84243 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.92□□□□□ -0.34
H3F3AP84243 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 CICP16-201ENST00000502609 2813 ntBASIC12.92□□□□□ -0.34
H3F3AP84243 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.92□□□□□ -0.34
H3F3AP84243 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
H3F3AP84243 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.92□□□□□ -0.34
H3F3AP84243 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3AP84243 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
H3F3AP84243 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
H3F3AP84243 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.91□□□□□ -0.34
H3F3AP84243 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3AP84243 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms