Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 CYP4F23P-201ENST00000593402 1579 ntBASIC12.64□□□□□ -0.39
HIST1H3AP68431 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 AC023794.5-201ENST00000564380 2157 ntBASIC12.63□□□□□ -0.39
HIST1H3AP68431 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 AL157996.1-201ENST00000624684 2299 ntBASIC12.63□□□□□ -0.39
HIST1H3AP68431 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.63□□□□□ -0.39
HIST1H3AP68431 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 KRT223P-202ENST00000449164 1292 ntBASIC12.63□□□□□ -0.39
HIST1H3AP68431 KRT18P15-201ENST00000458108 1291 ntBASIC12.63□□□□□ -0.39
HIST1H3AP68431 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 AC006122.1-201ENST00000493323 440 ntBASIC12.63□□□□□ -0.39
HIST1H3AP68431 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 AC005962.1-201ENST00000584100 773 ntBASIC12.63□□□□□ -0.39
HIST1H3AP68431 MIR4259-201ENST00000584466 101 ntBASIC12.63□□□□□ -0.39
HIST1H3AP68431 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 AC133552.6-201ENST00000613406 534 ntBASIC12.63□□□□□ -0.39
HIST1H3AP68431 AP000346.4-201ENST00000614827 381 ntBASIC12.63□□□□□ -0.39
HIST1H3AP68431 AC133540.1-201ENST00000620845 1019 ntBASIC12.63□□□□□ -0.39
HIST1H3AP68431 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.63□□□□□ -0.39
HIST1H3AP68431 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H3AP68431 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.62□□□□□ -0.39
HIST1H3AP68431 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 KRT18P36-201ENST00000411618 1276 ntBASIC12.62□□□□□ -0.39
HIST1H3AP68431 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms