Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERVK_113P62684 GUSBP10-201ENST00000417412 665 ntBASIC16.66■□□□□ 0.26
HERVK_113P62684 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERVK_113P62684 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.66■□□□□ 0.26
HERVK_113P62684 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HERVK_113P62684 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.66■□□□□ 0.26
HERVK_113P62684 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.66■□□□□ 0.26
HERVK_113P62684 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERVK_113P62684 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.66■□□□□ 0.26
HERVK_113P62684 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HERVK_113P62684 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.66■□□□□ 0.26
HERVK_113P62684 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERVK_113P62684 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HERVK_113P62684 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERVK_113P62684 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERVK_113P62684 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERVK_113P62684 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERVK_113P62684 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERVK_113P62684 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
HERVK_113P62684 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HERVK_113P62684 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.65■□□□□ 0.26
HERVK_113P62684 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HERVK_113P62684 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERVK_113P62684 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERVK_113P62684 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERVK_113P62684 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.65■□□□□ 0.26
HERVK_113P62684 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
HERVK_113P62684 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.65■□□□□ 0.26
HERVK_113P62684 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERVK_113P62684 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.65■□□□□ 0.26
HERVK_113P62684 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERVK_113P62684 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.65■□□□□ 0.26
HERVK_113P62684 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.65■□□□□ 0.26
HERVK_113P62684 AL357563.1-201ENST00000404728 395 ntBASIC16.65■□□□□ 0.26
HERVK_113P62684 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.65■□□□□ 0.26
HERVK_113P62684 RPL18AP8-201ENST00000486071 528 ntBASIC16.65■□□□□ 0.26
HERVK_113P62684 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.65■□□□□ 0.26
HERVK_113P62684 HERC2P11-201ENST00000562845 725 ntBASIC16.65■□□□□ 0.26
HERVK_113P62684 AC100756.2-201ENST00000569537 736 ntBASIC16.65■□□□□ 0.26
HERVK_113P62684 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.65■□□□□ 0.26
HERVK_113P62684 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.65■□□□□ 0.26
HERVK_113P62684 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.65■□□□□ 0.26
HERVK_113P62684 AP000322.3-201ENST00000608665 388 ntBASIC16.65■□□□□ 0.26
HERVK_113P62684 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HERVK_113P62684 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
HERVK_113P62684 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERVK_113P62684 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERVK_113P62684 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERVK_113P62684 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HERVK_113P62684 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.65■□□□□ 0.26
HERVK_113P62684 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HERVK_113P62684 AC018529.2-202ENST00000611482 3087 ntBASIC16.65■□□□□ 0.26
HERVK_113P62684 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
HERVK_113P62684 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.65■□□□□ 0.26
HERVK_113P62684 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERVK_113P62684 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HERVK_113P62684 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HERVK_113P62684 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.65■□□□□ 0.26
HERVK_113P62684 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HERVK_113P62684 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
HERVK_113P62684 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
HERVK_113P62684 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
HERVK_113P62684 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERVK_113P62684 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERVK_113P62684 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERVK_113P62684 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERVK_113P62684 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERVK_113P62684 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERVK_113P62684 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERVK_113P62684 LINC01230-201ENST00000625222 3017 ntBASIC16.64■□□□□ 0.25
HERVK_113P62684 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERVK_113P62684 BAK1P1-201ENST00000317045 636 ntBASIC16.64■□□□□ 0.25
HERVK_113P62684 MIR645-201ENST00000385283 94 ntBASIC16.64■□□□□ 0.25
HERVK_113P62684 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERVK_113P62684 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
HERVK_113P62684 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERVK_113P62684 OR8T1P-201ENST00000421347 918 ntBASIC16.64■□□□□ 0.25
HERVK_113P62684 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.64■□□□□ 0.25
HERVK_113P62684 ALG1L6P-201ENST00000515248 758 ntBASIC16.64■□□□□ 0.25
HERVK_113P62684 RNA5SP417-201ENST00000516459 108 ntBASIC16.64■□□□□ 0.25
HERVK_113P62684 ALG1L13P-202ENST00000519320 584 ntBASIC16.64■□□□□ 0.25
HERVK_113P62684 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HERVK_113P62684 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.64■□□□□ 0.25
HERVK_113P62684 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.64■□□□□ 0.25
HERVK_113P62684 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.64■□□□□ 0.25
HERVK_113P62684 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.64■□□□□ 0.25
HERVK_113P62684 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.64■□□□□ 0.25
HERVK_113P62684 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERVK_113P62684 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HERVK_113P62684 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERVK_113P62684 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.64■□□□□ 0.25
HERVK_113P62684 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.64■□□□□ 0.25
HERVK_113P62684 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HERVK_113P62684 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.64■□□□□ 0.25
HERVK_113P62684 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERVK_113P62684 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HERVK_113P62684 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERVK_113P62684 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERVK_113P62684 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERVK_113P62684 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms