Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.78□□□□□ -0.36
SEC61A1P61619 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.78□□□□□ -0.36
SEC61A1P61619 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SEC61A1P61619 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC61A1P61619 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.78□□□□□ -0.36
SEC61A1P61619 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SEC61A1P61619 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SEC61A1P61619 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SEC61A1P61619 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SEC61A1P61619 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
SEC61A1P61619 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.77□□□□□ -0.36
SEC61A1P61619 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SEC61A1P61619 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.77□□□□□ -0.36
SEC61A1P61619 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SEC61A1P61619 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
SEC61A1P61619 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SEC61A1P61619 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.77□□□□□ -0.36
SEC61A1P61619 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.77□□□□□ -0.36
SEC61A1P61619 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SEC61A1P61619 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SEC61A1P61619 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SEC61A1P61619 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SEC61A1P61619 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.77□□□□□ -0.37
SEC61A1P61619 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.77□□□□□ -0.37
SEC61A1P61619 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SEC61A1P61619 BOLA2P3-201ENST00000404566 256 ntBASIC12.77□□□□□ -0.37
SEC61A1P61619 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.77□□□□□ -0.37
SEC61A1P61619 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.77□□□□□ -0.37
SEC61A1P61619 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.77□□□□□ -0.37
SEC61A1P61619 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.77□□□□□ -0.37
SEC61A1P61619 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.77□□□□□ -0.37
SEC61A1P61619 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.77□□□□□ -0.37
SEC61A1P61619 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SEC61A1P61619 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.77□□□□□ -0.37
SEC61A1P61619 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.77□□□□□ -0.37
SEC61A1P61619 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.77□□□□□ -0.37
SEC61A1P61619 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.77□□□□□ -0.37
SEC61A1P61619 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.77□□□□□ -0.37
SEC61A1P61619 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.77□□□□□ -0.37
SEC61A1P61619 GNRHR2-203ENST00000581100 1187 ntBASIC12.77□□□□□ -0.37
SEC61A1P61619 MIR6752-201ENST00000618442 71 ntBASIC12.77□□□□□ -0.37
SEC61A1P61619 COX11-210ENST00000639671 696 ntBASIC12.77□□□□□ -0.37
SEC61A1P61619 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.77□□□□□ -0.37
SEC61A1P61619 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.77□□□□□ -0.37
SEC61A1P61619 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.77□□□□□ -0.37
SEC61A1P61619 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.77□□□□□ -0.37
SEC61A1P61619 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 CICP16-201ENST00000502609 2813 ntBASIC12.77□□□□□ -0.37
SEC61A1P61619 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.77□□□□□ -0.37
SEC61A1P61619 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.77□□□□□ -0.37
SEC61A1P61619 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
SEC61A1P61619 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
SEC61A1P61619 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SEC61A1P61619 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SEC61A1P61619 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SEC61A1P61619 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.76□□□□□ -0.37
SEC61A1P61619 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SEC61A1P61619 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.76□□□□□ -0.37
SEC61A1P61619 AC068760.1-201ENST00000493579 1953 ntBASIC12.76□□□□□ -0.37
SEC61A1P61619 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.76□□□□□ -0.37
SEC61A1P61619 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC61A1P61619 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SEC61A1P61619 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.76□□□□□ -0.37
SEC61A1P61619 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC61A1P61619 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SEC61A1P61619 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.76□□□□□ -0.37
SEC61A1P61619 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms