Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.64□□□□□ -0.39
CLDN12P56749 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 AC104794.3-201ENST00000566840 1248 ntBASIC12.64□□□□□ -0.39
CLDN12P56749 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
CLDN12P56749 BRI3BPP1-201ENST00000594224 787 ntBASIC12.64□□□□□ -0.39
CLDN12P56749 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.64□□□□□ -0.39
CLDN12P56749 AC134684.3-201ENST00000641758 218 ntBASIC12.64□□□□□ -0.39
CLDN12P56749 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CLDN12P56749 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.64□□□□□ -0.39
CLDN12P56749 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CLDN12P56749 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
CLDN12P56749 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN12P56749 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN12P56749 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN12P56749 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN12P56749 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CLDN12P56749 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN12P56749 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CLDN12P56749 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN12P56749 AC073869.1-201ENST00000415574 2762 ntBASIC12.63□□□□□ -0.39
CLDN12P56749 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN12P56749 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.63□□□□□ -0.39
CLDN12P56749 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
CLDN12P56749 C1QBPP1-201ENST00000400117 770 ntBASIC12.63□□□□□ -0.39
CLDN12P56749 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
CLDN12P56749 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN12P56749 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN12P56749 AC134915.1-201ENST00000426461 574 ntBASIC12.63□□□□□ -0.39
CLDN12P56749 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN12P56749 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN12P56749 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN12P56749 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN12P56749 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN12P56749 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.63□□□□□ -0.39
CLDN12P56749 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN12P56749 TPRX2P-201ENST00000535362 881 ntBASIC12.63□□□□□ -0.39
CLDN12P56749 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CLDN12P56749 AC025678.2-201ENST00000562061 970 ntBASIC12.63□□□□□ -0.39
CLDN12P56749 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.63□□□□□ -0.39
CLDN12P56749 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN12P56749 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.63□□□□□ -0.39
CLDN12P56749 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.63□□□□□ -0.39
CLDN12P56749 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN12P56749 AP001002.3-201ENST00000623482 206 ntBASIC12.63□□□□□ -0.39
CLDN12P56749 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN12P56749 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CLDN12P56749 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN12P56749 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CLDN12P56749 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN12P56749 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN12P56749 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN12P56749 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CLDN12P56749 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN12P56749 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN12P56749 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms