Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 STK26-204ENST00000481105 1835 ntTSL 2 BASIC10.77□□□□□ -0.68
CMC4P56277 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC10.77□□□□□ -0.68
CMC4P56277 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC10.77□□□□□ -0.68
CMC4P56277 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
CMC4P56277 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC10.77□□□□□ -0.68
CMC4P56277 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
CMC4P56277 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC10.77□□□□□ -0.68
CMC4P56277 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CMC4P56277 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
CMC4P56277 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
CMC4P56277 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 AL157791.1-201ENST00000553667 1699 ntBASIC10.77□□□□□ -0.69
CMC4P56277 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC10.77□□□□□ -0.69
CMC4P56277 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC10.77□□□□□ -0.69
CMC4P56277 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
CMC4P56277 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
CMC4P56277 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
CMC4P56277 MIR1247-201ENST00000408206 136 ntBASIC10.77□□□□□ -0.69
CMC4P56277 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC10.77□□□□□ -0.69
CMC4P56277 TSPY25P-201ENST00000429463 745 ntBASIC10.77□□□□□ -0.69
CMC4P56277 AC007274.1-201ENST00000439805 662 ntBASIC10.77□□□□□ -0.69
CMC4P56277 AC006335.1-201ENST00000445200 547 ntBASIC10.77□□□□□ -0.69
CMC4P56277 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC10.77□□□□□ -0.69
CMC4P56277 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 KRT18P15-201ENST00000458108 1291 ntBASIC10.77□□□□□ -0.69
CMC4P56277 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC10.77□□□□□ -0.69
CMC4P56277 AC090857.1-201ENST00000527400 390 ntBASIC10.77□□□□□ -0.69
CMC4P56277 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC10.77□□□□□ -0.69
CMC4P56277 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC10.77□□□□□ -0.69
CMC4P56277 MIR4525-201ENST00000580000 75 ntBASIC10.77□□□□□ -0.69
CMC4P56277 MIR4538-201ENST00000581377 78 ntBASIC10.77□□□□□ -0.69
CMC4P56277 KLK3-207ENST00000595952 969 ntTSL 3 BASIC10.77□□□□□ -0.69
CMC4P56277 NDUFV2P1-201ENST00000596415 907 ntBASIC10.77□□□□□ -0.69
CMC4P56277 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC10.77□□□□□ -0.69
CMC4P56277 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC10.77□□□□□ -0.69
CMC4P56277 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC10.77□□□□□ -0.69
CMC4P56277 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC10.77□□□□□ -0.69
CMC4P56277 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
CMC4P56277 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC10.77□□□□□ -0.69
CMC4P56277 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
CMC4P56277 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC10.77□□□□□ -0.69
CMC4P56277 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC10.77□□□□□ -0.69
CMC4P56277 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
CMC4P56277 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
CMC4P56277 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.77□□□□□ -0.69
CMC4P56277 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
CMC4P56277 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC10.77□□□□□ -0.69
CMC4P56277 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CMC4P56277 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC10.77□□□□□ -0.69
CMC4P56277 AC140479.7-201ENST00000636301 2332 ntBASIC10.76□□□□□ -0.69
CMC4P56277 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
CMC4P56277 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC10.76□□□□□ -0.69
CMC4P56277 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
CMC4P56277 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC10.76□□□□□ -0.69
CMC4P56277 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
CMC4P56277 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC10.76□□□□□ -0.69
CMC4P56277 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
CMC4P56277 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC10.76□□□□□ -0.69
CMC4P56277 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
CMC4P56277 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC10.76□□□□□ -0.69
CMC4P56277 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
CMC4P56277 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 CRCP-204ENST00000398684 492 ntTSL 2 BASIC10.76□□□□□ -0.69
CMC4P56277 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC10.76□□□□□ -0.69
CMC4P56277 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC10.76□□□□□ -0.69
CMC4P56277 Z97180.1-201ENST00000445173 988 ntBASIC10.76□□□□□ -0.69
CMC4P56277 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
CMC4P56277 RN7SL530P-201ENST00000485097 298 ntBASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms