Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
FOXG1P55316 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
FOXG1P55316 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 HSPA7-201ENST00000445535 1927 ntBASIC12.63□□□□□ -0.39
FOXG1P55316 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.63□□□□□ -0.39
FOXG1P55316 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
FOXG1P55316 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
FOXG1P55316 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 RPS9P1-201ENST00000419943 583 ntBASIC12.63□□□□□ -0.39
FOXG1P55316 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.63□□□□□ -0.39
FOXG1P55316 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.63□□□□□ -0.39
FOXG1P55316 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.63□□□□□ -0.39
FOXG1P55316 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 AL161670.2-201ENST00000557650 1227 ntBASIC12.63□□□□□ -0.39
FOXG1P55316 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
FOXG1P55316 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.63□□□□□ -0.39
FOXG1P55316 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
FOXG1P55316 AC020922.3-201ENST00000595064 547 ntBASIC12.63□□□□□ -0.39
FOXG1P55316 AL022334.2-201ENST00000610000 484 ntBASIC12.63□□□□□ -0.39
FOXG1P55316 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.63□□□□□ -0.39
FOXG1P55316 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
FOXG1P55316 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
FOXG1P55316 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.63□□□□□ -0.39
FOXG1P55316 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
FOXG1P55316 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.62□□□□□ -0.39
FOXG1P55316 FRMPD2B-201ENST00000431305 1347 ntBASIC12.62□□□□□ -0.39
FOXG1P55316 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
FOXG1P55316 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
FOXG1P55316 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.62□□□□□ -0.39
FOXG1P55316 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.62□□□□□ -0.39
FOXG1P55316 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
FOXG1P55316 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.62□□□□□ -0.39
FOXG1P55316 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
FOXG1P55316 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
FOXG1P55316 AC016397.2-201ENST00000624848 1985 ntBASIC12.62□□□□□ -0.39
FOXG1P55316 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.62□□□□□ -0.39
FOXG1P55316 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.62□□□□□ -0.39
FOXG1P55316 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
FOXG1P55316 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
FOXG1P55316 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.62□□□□□ -0.39
FOXG1P55316 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.62□□□□□ -0.39
FOXG1P55316 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.62□□□□□ -0.39
FOXG1P55316 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.62□□□□□ -0.39
FOXG1P55316 AC116345.2-201ENST00000512837 523 ntBASIC12.62□□□□□ -0.39
FOXG1P55316 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.62□□□□□ -0.39
FOXG1P55316 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.62□□□□□ -0.39
FOXG1P55316 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.62□□□□□ -0.39
FOXG1P55316 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.62□□□□□ -0.39
FOXG1P55316 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
FOXG1P55316 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.62□□□□□ -0.39
FOXG1P55316 MIR3188-201ENST00000583494 85 ntBASIC12.62□□□□□ -0.39
FOXG1P55316 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.62□□□□□ -0.39
FOXG1P55316 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.62□□□□□ -0.39
FOXG1P55316 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.62□□□□□ -0.39
FOXG1P55316 AL109837.1-201ENST00000603272 613 ntBASIC12.62□□□□□ -0.39
FOXG1P55316 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.62□□□□□ -0.39
FOXG1P55316 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.62□□□□□ -0.39
FOXG1P55316 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
FOXG1P55316 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.62□□□□□ -0.39
FOXG1P55316 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.62□□□□□ -0.39
FOXG1P55316 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FOXG1P55316 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
FOXG1P55316 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms