Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH13P55290 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDH13P55290 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDH13P55290 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.18□□□□□ -0.14
CDH13P55290 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CDH13P55290 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.18□□□□□ -0.14
CDH13P55290 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.18□□□□□ -0.14
CDH13P55290 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CDH13P55290 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CDH13P55290 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 CD8B2-202ENST00000417670 633 ntBASIC14.18□□□□□ -0.14
CDH13P55290 TMEM14DP-201ENST00000422205 345 ntBASIC14.18□□□□□ -0.14
CDH13P55290 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDH13P55290 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.18□□□□□ -0.14
CDH13P55290 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH13P55290 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.18□□□□□ -0.14
CDH13P55290 COX5BP1-201ENST00000507622 393 ntBASIC14.18□□□□□ -0.14
CDH13P55290 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CDH13P55290 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
CDH13P55290 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH13P55290 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH13P55290 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.18□□□□□ -0.14
CDH13P55290 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.18□□□□□ -0.14
CDH13P55290 AC008735.3-201ENST00000596646 500 ntBASIC14.18□□□□□ -0.14
CDH13P55290 AC073413.1-201ENST00000603927 732 ntBASIC14.18□□□□□ -0.14
CDH13P55290 AL358472.3-201ENST00000608147 415 ntBASIC14.18□□□□□ -0.14
CDH13P55290 AC027601.3-201ENST00000622907 509 ntBASIC14.18□□□□□ -0.14
CDH13P55290 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 AL354989.2-201ENST00000435838 1540 ntBASIC14.18□□□□□ -0.14
CDH13P55290 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH13P55290 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDH13P55290 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CDH13P55290 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH13P55290 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.18□□□□□ -0.14
CDH13P55290 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH13P55290 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH13P55290 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH13P55290 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH13P55290 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH13P55290 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH13P55290 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.17□□□□□ -0.14
CDH13P55290 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDH13P55290 PPT1-213ENST00000641319 2388 ntBASIC14.17□□□□□ -0.14
CDH13P55290 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH13P55290 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CDH13P55290 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH13P55290 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CDH13P55290 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH13P55290 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH13P55290 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH13P55290 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH13P55290 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH13P55290 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH13P55290 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH13P55290 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH13P55290 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.17□□□□□ -0.14
CDH13P55290 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH13P55290 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
CDH13P55290 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.17□□□□□ -0.14
CDH13P55290 INE1-201ENST00000456273 945 ntBASIC14.17□□□□□ -0.14
CDH13P55290 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.17□□□□□ -0.14
CDH13P55290 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH13P55290 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.17□□□□□ -0.14
CDH13P55290 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH13P55290 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.17□□□□□ -0.14
CDH13P55290 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH13P55290 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH13P55290 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH13P55290 AC104506.1-201ENST00000609247 429 ntBASIC14.17□□□□□ -0.14
CDH13P55290 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.17□□□□□ -0.14
CDH13P55290 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CDH13P55290 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
CDH13P55290 AC138951.2-201ENST00000623455 1161 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms